Gene Information

Name : Mmwyl1_3812 (Mmwyl1_3812)
Accession : YP_001342646.1
Strain : Marinomonas sp. MWYL1
Genome accession: NC_009654
Putative virulence/resistance : Virulence
Product : ECF subfamily RNA polymerase sigma-24 factor
Function : -
COG functional category : K : Transcription
COG ID : COG1595
EC number : -
Position : 4298144 - 4298662 bp
Length : 519 bp
Strand : -
Note : TIGRFAM: RNA polymerase sigma-70; PFAM: sigma-70 region 2 domain protein; sigma-70 region 4 domain protein; Sigma-70 region 4 type 2; KEGG: eca:ECA0813 RNA polymerase sigma factor

DNA sequence : 
ATGAATCCTGAGCGTCAAAAATCTCAACAGGTTGGTGAGCTTTATGCTGAGCATAGCTCATGGCTCACTGGATGGATTCG
TAGCCGCCTTGGTTGTCATGAATTGGCAGCAGATATTGCACAAGATACTTTTGTGCGATTGCTTAAAAGACCGAAATACT
TTTCTAATATGGGCGAAGCCAGAGCTTTTTTGAGCACCATTGCCAAAGGCTTGTATATCGATCACTGGCGGCGTAAGCAG
GTCGAGCAGGCTTGGTTGGAGTCTTTAGCCCATTGCGACGAAGAGTTTGTGCCTTCAGCAGAACATTCAGCCTCTATGAT
TGAATTGCTTTGCGAACTAGACGCGATGATCGCTAAGTTACCTAAAAAAGTGGCAAATACGCTTATTTTGTCTCAACTCC
ATGGTTTGACCTACCGAGAAATTGCCGAACGTTTGTCCGTATCAGAGCGCATGGTGAAGCGCTATATGGCACAGGCGATG
TTGCAATGTCTTTTGTTTAAGTCCGATCGGTCTCTTTAG

Protein sequence : 
MNPERQKSQQVGELYAEHSSWLTGWIRSRLGCHELAADIAQDTFVRLLKRPKYFSNMGEARAFLSTIAKGLYIDHWRRKQ
VEQAWLESLAHCDEEFVPSAEHSASMIELLCELDAMIAKLPKKVANTLILSQLHGLTYREIAERLSVSERMVKRYMAQAM
LQCLLFKSDRSL

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
unnamed AAL08458.1 FecI Virulence SRL Protein 9e-25 44

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Mmwyl1_3812 YP_001342646.1 ECF subfamily RNA polymerase sigma-24 factor VFG1049 Protein 4e-25 44