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Name : secD (Asuc_1051) Accession : YP_001344352.1 Strain : Actinobacillus succinogenes 130Z Genome accession: NC_009655 Putative virulence/resistance : Unknown Product : preprotein translocase subunit SecD Function : - COG functional category : U : Intracellular trafficking, secretion and vesicular transport COG ID : COG0342 EC number : - Position : 1152841 - 1154691 bp Length : 1851 bp Strand : - Note : part of the preprotein secretory system; when complexed with proteins SecF and YajC, SecDFyajC stimulates the proton motive force-driven protein translocation, and appears to be required for the release of mature proteins from the extracytoplasmic side of DNA sequence : ATGTTAAACCGTTTCCCTTTATGGAAGAATCTAATGGTGATCTTTATGATCGCCATTGGTGCTTTATATGCCCTTCCAAA TATTTACGGTGAAGATCCTGCCGTACAAATTTCCGGTACCCGAGGTCACGAAGCGAACGAGGACACGTTAAGCGACGTAC AAAATCTATTAGCGGGTAACCGGCTTACCACTAAATCCATTGTGCTGGAAAACGGCACGATCTTGGCACGTTTCAATAAC ACCAACGATCAGCTGTTAGCTAAGGATAAAATCGTAGAAAAACTCGGCACAGGCTATTCTGTTGCGTTAAACCTGGCACC GGCGACGCCTGCCTGGCTAAGCAGTATCGGCGGCAGTCCGATGAAATGGGGACTGGACTTGCGCGGTGGCGTACGCTTTC TGATGGAAGTGGATATGAACACGGCGCTAAGTAAGCGTCAGGAGCAACTGCAAGACAGTATAAAAACCGAACTACGTAAA GAAAAAATTCAATATGCCGCAGTACAAAACGGTGAAAATTTCAGCTCGATCGTAACATTAGTCAACCCGGAACAACGTTT TCCGGCGCTGCAGTTATTGCGTAAAGCACATCCGAACTTAACCGTAACGGATACCAATGACACCACGATTTCTCTTGCTC TGTCCGATGCCGCGTTAATTGAAGCACGAGACAGCGCAATTGAACAAAACCTCAATATTTTACGTAAACGTGTGGGGGAA CTGGGTGTGGCCGAAGCGGTTATTCAACGTCAGGGCGCCGAACGAATTGTGGTTGAATTGCCGGGTATTCAGGATACGGC ACGCGCCAAAGAAATTTTAGGCGCTACCGCTACCTTGGAATTCCGTTTGGTGAATACTAACGTCACGCCTGAAGCCATGC GTCGTAACATTGTGCCGTCGGATACGGAAATTCAGTATCAGCCGGACGGTACCCCCGTAGCATTATTTAAAAAATCCATG CTGGGCGGCGAACATATTATTAACTCTTCCGCCGGTATCGATAACCAAACGGGCGGCACGCAGGTCAGCGTTACGCTTGA TGCGGAAGGCGGCGATATTATGTCGCAAATTACTAAACTCAACTTAAAAAAACCGATGGCAACGCTTTACGTTGAATATA AAGATTCCGGTAAAAAAGATGCGAACGGTAAAGTGGTTTTAGAAAAGCACGCCGAAGTGATCAGCGTCGCGACCATTCAA GGTCGTTTCGGTAGTAACTTCCAGATCACCGGTTCCGGTACCATGGCGGAAGCGCAGAATCTTTCCGTACTGCTTCGTTC CGGTGCGCTAATCGCGCCGATTCAAATTGTCGAGGAGCGGACGGTCGGTCCTTCACTGGGGGCGCAAAACGTAGAACAAG GGCTGAAAGCCGGTCTCTGGGGTTTAGCTATCGTGATAGTTTTCTGTTTAATTTACTACAAACTATTCGGTTTCATCGCC TGTCTGGCCTTATGCGTCAATATGATTCTAGTAGTGGGATTGATGTCTCTGTTACCGGGCGCAACGCTTACTATGCCGGG TATCGCGGGTATCATTCTGTCCGTCGGGATGTCAGTGGATGCCAATGTATTGATTTTCGAACGAATAAAAGAAGAAATAC GTAACGGCCGTCCGATTCAGCAAGCCATTGATGAAGGTTATAACGGTGCTTGGACATCTATTTTCGATGCCAACTTAACC ACGATCTTAACCTCTATCGTTCTGTACGCGGTGGGAACCGGTCCGGTTAAAGGTTTTGCCATTACCCTTTCGCTGGGGGT TGCGATTTCGATGTTTACCGCGATTACGGGTACGCGTATGCTCGTAAACTGGATTTACGGCGGTAAACGTGTTGAAAAAT TATCAATTTAG Protein sequence : MLNRFPLWKNLMVIFMIAIGALYALPNIYGEDPAVQISGTRGHEANEDTLSDVQNLLAGNRLTTKSIVLENGTILARFNN TNDQLLAKDKIVEKLGTGYSVALNLAPATPAWLSSIGGSPMKWGLDLRGGVRFLMEVDMNTALSKRQEQLQDSIKTELRK EKIQYAAVQNGENFSSIVTLVNPEQRFPALQLLRKAHPNLTVTDTNDTTISLALSDAALIEARDSAIEQNLNILRKRVGE LGVAEAVIQRQGAERIVVELPGIQDTARAKEILGATATLEFRLVNTNVTPEAMRRNIVPSDTEIQYQPDGTPVALFKKSM LGGEHIINSSAGIDNQTGGTQVSVTLDAEGGDIMSQITKLNLKKPMATLYVEYKDSGKKDANGKVVLEKHAEVISVATIQ GRFGSNFQITGSGTMAEAQNLSVLLRSGALIAPIQIVEERTVGPSLGAQNVEQGLKAGLWGLAIVIVFCLIYYKLFGFIA CLALCVNMILVVGLMSLLPGATLTMPGIAGIILSVGMSVDANVLIFERIKEEIRNGRPIQQAIDEGYNGAWTSIFDANLT TILTSIVLYAVGTGPVKGFAITLSLGVAISMFTAITGTRMLVNWIYGGKRVEKLSI |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| secD | AAT96103.1 | SecD | Not tested | T-PAI | Protein | 1e-119 | 44 |
| secD | AAT96039.1 | SecD | Not tested | T-PAI | Protein | 2e-118 | 44 |
| secD | AAT96067.1 | SecD | Not tested | T-PAI | Protein | 2e-118 | 44 |
| secD | AAT96119.1 | SecD | Not tested | T-PAI | Protein | 2e-118 | 44 |
| secD | AAT96179.1 | SecD | Not tested | T-PAI | Protein | 1e-118 | 44 |
