|
Name : Asuc_0848 (Asuc_0848) Accession : YP_001344153.1 Strain : Actinobacillus succinogenes 130Z Genome accession: NC_009655 Putative virulence/resistance : Unknown Product : cytochrome c-type biogenesis protein CcmF Function : - COG functional category : O : Posttranslational modification, protein turnover, chaperones COG ID : COG1138 EC number : - Position : 905546 - 907504 bp Length : 1959 bp Strand : + Note : TIGRFAM: cytochrome c-type biogenesis protein CcmF; PFAM: cytochrome c assembly protein; KEGG: pmu:PM0010 cytochrome C-type biogenesis DNA sequence : ATGATTGCAGAATTAGGTAACTATGCGCTTGCACTCAGTTTAGCCGTATCGGTTTTTCTGGTGATTTTTCCTTTATGGGG CGCAGAAAAAGGTAACATTCAATTTATGGCATTGGCGCGTCCGATGACATACGGTTTGTTTTTATCGCTTAGCGTGGCAT TCGGTGCGCTGTTTTATGCTTTTGCGGTAAATGATTTCAGCGTGCAATATGTGGTGAATAATTCCAATTCCACATTACCC CTGCATTATCGCTTGTCTGCGGTATGGGGGTCGCATGAAGGGTCCTTGCTGCTTTGGATTTGGATGCTGACGTTATGGGG GACCGCCGTTGCATTGTTCAGTAAACGGTTACCGCAGGAAGCGGTGGCGCGCGTATTGGGTATTATGGGAATTATCAGTA TTGGTTTCCTGTTGTTCGTGCTGTTTACCTCCAATCCGTTTGTCCGCACCTTTCCTGATTTCCCGGCGGACGGACGGGAA CTGAATCCGTTGCTGCAGGATGTGGGACTTATTTTCCATCCGCCTTTACTATATATGGGCTATGTGGGATTTTCGGTGGC TTTTGCTTTTGCTATTGCCTCATTAATGACGGGAAAGCTGGATACCGCATGGGCGCGTTGGTCTCGTCCTTGGACGATGG CGGCTTGGGTGTTTTTAACTTTAGGGATTGTACTCGGTTCCTGGTGGGCATATTATGAGCTCGGTTGGGGCGGATGGTGG TTTTGGGATCCCGTAGAAAATGCCTCGTTGATGCCTTGGTTGGCGGGAACGGCGTTATTACACAGCTTGGCTGTGACGGA AAAACGCGGTTCTTTCAAAGCCTGGACGGTGTTACTGGCAATTTTGGCTTTCTCACTTTGCTTGCTCGGCACATTTTTAG TACGTTCCGGGATTCTGGTTTCCGTCCATGCTTTCGCTTCGGATCCGACGCGCGGTTTGTATATTTTAGCATATCTTGTG GTGGTTATCGGCGGCTCGTTAACCTTGTATGCGATTAAGGGAAACCAAATCCGTTCCCGTGATAACTCGGAACGGTATTC GCGTGAAAGCATGCTGTTATTAAATAATATCTTTTTGATGACCGCACTTTCTGTTGTGCTGTTAGGTACCTTGTTACCGT TGGTGCATAAACAATTAGGATTAGGCACCATTTCTATCGGCGCACCGTTTTTTGACCAAATGTTCCTGATTATCTGTACG CCGTTTGCGTTGTTATTAGGAATCGGCCCGTTGGTGAAGTGGCGCCGGGATCAATTTTCGGCCATCCGTAAGCCGGTGAT TATCAGTGTGATTCTTATGGCGTTGCTGGGTTTCGGCTTGCCGTTACTGTTGCAGAATAAACTTACGGTGTCTGCCGTAT TGGGCGTGATGATGTCGGCGATTATTGTGTTGCTCAGTCTGTATGAGTTACATCTGCGGGCGACCCATCGTTCAGACTTC TGGACGGGATTAAGTAAATTATCCCGTTCCCACTGGGGGATGATAGCCGCTCATTTGGGGGTGGCGATGACGATTTGGGG CGTCGCTTTCAGTCAGAATTACAGCGTTGAACGTGATGTGCGTATGAACGTGGGCGACAGCGTACAAATCGAAGATTATC GGTTCGAATTTAAAGGTATCAGCGAGGCGAACGGTCCAAATTATGCCGGCGGAAAAGCACAAGTGGATATTTTTGTGAAT GATAAACCGGAAGCTACGTTGTTTGCCGAAAAACGTTTTTATACCGTGAGTAAAATGACTATGACGGAAGCTGCGATTGA CTGGGGATTTACCCGCGACCTGTACGTGGCTTTGGGGGAAAGTCTAGGGGACGGTTCTTGGGCGTTACGCTTATATTATA AACCGTTTGTCCGTTGGATTTGGTTCGGCGGTTTATTTATGGTATTAGGCGGATTGCTTTGTATGAGCGATCGTCGCTAC CGTTTTTCAAAAATTGTAAAAGAAAAAATAAATGAATAA Protein sequence : MIAELGNYALALSLAVSVFLVIFPLWGAEKGNIQFMALARPMTYGLFLSLSVAFGALFYAFAVNDFSVQYVVNNSNSTLP LHYRLSAVWGSHEGSLLLWIWMLTLWGTAVALFSKRLPQEAVARVLGIMGIISIGFLLFVLFTSNPFVRTFPDFPADGRE LNPLLQDVGLIFHPPLLYMGYVGFSVAFAFAIASLMTGKLDTAWARWSRPWTMAAWVFLTLGIVLGSWWAYYELGWGGWW FWDPVENASLMPWLAGTALLHSLAVTEKRGSFKAWTVLLAILAFSLCLLGTFLVRSGILVSVHAFASDPTRGLYILAYLV VVIGGSLTLYAIKGNQIRSRDNSERYSRESMLLLNNIFLMTALSVVLLGTLLPLVHKQLGLGTISIGAPFFDQMFLIICT PFALLLGIGPLVKWRRDQFSAIRKPVIISVILMALLGFGLPLLLQNKLTVSAVLGVMMSAIIVLLSLYELHLRATHRSDF WTGLSKLSRSHWGMIAAHLGVAMTIWGVAFSQNYSVERDVRMNVGDSVQIEDYRFEFKGISEANGPNYAGGKAQVDIFVN DKPEATLFAEKRFYTVSKMTMTEAAIDWGFTRDLYVALGESLGDGSWALRLYYKPFVRWIWFGGLFMVLGGLLCMSDRRY RFSKIVKEKINE |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| ccmF | YP_217241.1 | cytochrome c-type biogenesis protein | Not tested | SPI-12 | Protein | 9e-156 | 63 |
| ccmF | AAN62106.1 | putative cytochrome C-type biogenesis protein CcmF | Not tested | PAGI-2(C) | Protein | 5e-129 | 53 |
