Gene Information

Name : secF (PSPA7_1293)
Accession : YP_001346677.1
Strain : Pseudomonas aeruginosa PA7
Genome accession: NC_009656
Putative virulence/resistance : Unknown
Product : preprotein translocase subunit SecF
Function : -
COG functional category : U : Intracellular trafficking, secretion and vesicular transport
COG ID : COG0341
EC number : -
Position : 1309651 - 1310571 bp
Length : 921 bp
Strand : +
Note : forms a complex with SecD and YajC; SecDFyajC stimulates the proton motive force-driven protein translocation; seems to modulate the cycling of SecA by stabilizing its membrane-inserted state and appears to be required for the release of mature proteins f

DNA sequence :
ATGAATATCAAGATCGGTACCATCAACTTCATGGGCATTCGCAACGTTGCGTTTGCCGTCACCCTGATCCTCACCGTCAT
CGCCCTGGGCAGCTGGTTCACCAAGGGCATCAACTTCGGCCTCGACTTCACCGGCGGTACGCTGATCGAGCTGACCTACG
AGCAACCGGCCGATCTCGGCAAGGTGCGTGGGCAACTGGTCGGCGCCGGCTACGAGGACGCCGTGGTGCAGAGCTTCGGC
GATGCCCGCGACGTGCTGGTGCGCATGCCCAGCGAGGATCCCGAGCTGGGCAAGAAGGTCGCCGCTGCGCTGCAACAGGC
CGATACCGGCAACCCGGCGAGCCTGAAGCGGGTCGAGTACGTCGGCCCGCAGGTGGGTGAGGAACTGCGCGACCAGGGCG
GCCTCGGCATGCTCCTGGCGCTGGGCGGGATCCTGCTGTACGTCGGCTTCCGCTTCCAGTGGAAGTTCGCCCTCGGCGCG
ATCCTCTCGCTGGTGCATGACGCCATCATCGTGATGGGCGTGCTGTCGTTCTTCCAGGTGACCTTCGACCTGACCGTGCT
CGCCGCGGTGCTGGCGGTGGTCGGCTATTCGCTGAACGACACCATCGTGATCTTCGACCGGGTGCGGGAAAACTTCCGCG
TGCTGCGCAAGGCCAGCCTGATCGAGAACCTGAACATCTCCACCAGCCAGACCCTGTTGCGCACCATCGCCACCTCGGTG
TCCACGCTGCTGGCGATCGCCGCGCTGCTGTTCTTCGGCGGCGACAACCTGTTCGGTTTCTCCATCGCCCTGTTCGTCGG
GGTTCTGGCGGGAACCTACTCGTCGATCTACATCGCCAACGTGGTGCTGATCTGGCTGAACCTGACCAGCGAGGACCTGA
TCCCGCCGCAGGCCAAGGACACCGTCGACGATCGCCCCTGA

Protein sequence :
MNIKIGTINFMGIRNVAFAVTLILTVIALGSWFTKGINFGLDFTGGTLIELTYEQPADLGKVRGQLVGAGYEDAVVQSFG
DARDVLVRMPSEDPELGKKVAAALQQADTGNPASLKRVEYVGPQVGEELRDQGGLGMLLALGGILLYVGFRFQWKFALGA
ILSLVHDAIIVMGVLSFFQVTFDLTVLAAVLAVVGYSLNDTIVIFDRVRENFRVLRKASLIENLNISTSQTLLRTIATSV
STLLAIAALLFFGGDNLFGFSIALFVGVLAGTYSSIYIANVVLIWLNLTSEDLIPPQAKDTVDDRP

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
secF AAT96066.1 SecF Not tested T-PAI Protein 1e-88 77
secF AAT96102.1 SecF Not tested T-PAI Protein 8e-89 77