Gene Information

Name : PSPA7_1853 (PSPA7_1853)
Accession : YP_001347236.1
Strain : Pseudomonas aeruginosa PA7
Genome accession: NC_009656
Putative virulence/resistance : Virulence
Product : TonB-dependent receptor
Function : -
COG functional category : P : Inorganic ion transport and metabolism
COG ID : COG4772
EC number : -
Position : 1892977 - 1895142 bp
Length : 2166 bp
Strand : +
Note : Annotation generated by automatically transferring the annotation from the manually curated GenBank accession AE004091; identified by match to protein family HMM PF00593; match to protein family HMM PF07715; match to protein family HMM TIGR01783

DNA sequence :
ATGTCGTCCGTGAATACGTTGTCGCGCCTGGCCGTTGCCATCGCGCTGGGTGTGCCGCTGTCGTCGGTGCTGGCCGACGA
GGGCAGCAAGGAGCTGGGCACACTGACCGTGGTCGGTGACTGGCTCGGCGAGGCTGACCAGGCGGTGGTGCAGAACCATC
CCGGCGCGCGCAGCGTGGTGCGTCGCAAGGACATGGTCGAGAGCGGCGCGCAGAATGTCCGCGACGTGCTGCGCAAGGTG
CCCGGCGTACAGGTGCAGGACAACAACGGCACCGGCGGCAGCGACATTTCCCTGAACGTCGGGGTGCGTGGCCTGACTTC
ACGCCTGTCGCCGCGCTCGACGGTGATGATCGACGGCGTGCCGGCGGCGGTGGCGCCCTACGGCCAGCCGCAGTTGTCGA
TGATGCCGCTGTCCATCGGCAACCTGGAAAGCATCGACGTGGTGCGTGGCGCTGGCTCGGTGCGCTACGGCCCGCAGAAC
GTCGGCGGGGTGATCAACTTCGTGACCCGGGCGATTCCGGAGAAGCTCTCCGGCGAGGTCGGCACCACTCTCGAGCATGC
CGGCCACGGCGGCTGGAAGAAGCTCAACCAGGCGTTCCTCGGCGGGACCGCCGACAATGGCCTGGGCGTGGCGCTGCTGT
ATTCCGGGGTGAAGGGCGCCGACTACCGCGACGGCAACAACGACAACGATATCGACGACGTGCTGCTCAAGACCCACTGG
CAGCTCACCGACAGCGACCAGTTGGCGGCCAACTTCCACTACTACGACGCCTACGCCGACATGCCGGGCGGCCTGACCCA
GGCGCAGTACGACGACGATCCCTACCAGTCGCTGCGCGACTGGGACAACTTCCGCGGCCGGCGCAAAGACTTCTCGCTGA
AATACATCCGGCAGGTGGATGACCTCACCCGCTTCGAACTGCTCACCTACTACAGCGACAGCTTCCGCGGCAGCCGCATC
GCCGCGCGGAACCTGCGGACCATCACTTCGTATCCGCGCGACTATCATGTGTTCGCAGTGGAGCCGCGGGTCTCGCGGAT
CTTCTTCGCCGGTCCGACCACCCAGGAGGTCAGCGTCGGCTATCGCTACCTGAAGGAGGCGATGAACGAACGCGCCAGCC
AGTTGGCCCTGGTCGACAACGTGCCGACGGTCCGGCCGGGGGCGGACGGCCATACCTACCAGGACCGCACCGGCGGCACC
GAGGCCAGCGCTTTCTACATCGACGACAGGATCGACGTCGGCAACTGGACCATCACCCCCGGCATCCGCTTCGAGAAGAT
CGACAGCGACTGGCGCGAGCGTCCGGTACTCGGACTGAACGGCAGGCCGGTGCAGGAGAAGAAGCGCAGCAAGGACTACA
ACGAGCCGCTGCCGGCGCTGAGCCTGATGTACCACCTCAGCGACGAGTGGAAGCTGTTCGCCAACTACTCCGAGTCGTTC
GGCAGCCTGCAGTACTTCCAGCTCGGCCAGGGCGGCAGCGGCAACGACACCGCCGCCGGCCTGGAGCCGGAGAAGGCCAA
GACCTACGAGCTGGGCACGCGCTACGATAACGGCAGCTGGGGCGGCGAGATCACGCTGTTCTACATCGACTTCGACGACG
AACTGCAATACGTCAGCAACGACGTCGGCTGGACCAACCTCGGCGCGACCAAGCATCAGGGCATCGAGACTTCCGGCCAC
TATGACTTCGCCGCTCTCGACCCGCGCCTGGACGGTCTCTCGGTCTACGGCAGCCTCACCTATACCCGCGCCACCTACGA
AGGCGACCTCCCGTCCTTCAAGGGCCGCGACCTGCCGCTCTACTCGCGCAGGGTGGCCACTGCCGGGCTGCGCTACGAGG
TCGAGCGCTGGACCTACAACCTGGATGCCTTCGCCCAGTCCATGCAGCGGGCGCCGGGACTGAGCACCGACAGCCAGGGC
AACTTCACCCACAACTACATCACCGAGCCGAGCGGCGACGGCCAGTACGGCGATATCCCCGGCTACGTGACCTGGAACGC
GCGGGTCGGCTACGACTTCGGCCCGCAGGCGTCGAACCTGAAGCTCGGCCTGGGAGTGAAGAACCTGTTCGACAAGCAGT
ATTTCACCCGCTCCAGCGACAACAATTCGGGAATTTACGTGGGCCAGCCGCGCACCTTGTTCATGCAGGCCAGCGTCGGT
TTCTGA

Protein sequence :
MSSVNTLSRLAVAIALGVPLSSVLADEGSKELGTLTVVGDWLGEADQAVVQNHPGARSVVRRKDMVESGAQNVRDVLRKV
PGVQVQDNNGTGGSDISLNVGVRGLTSRLSPRSTVMIDGVPAAVAPYGQPQLSMMPLSIGNLESIDVVRGAGSVRYGPQN
VGGVINFVTRAIPEKLSGEVGTTLEHAGHGGWKKLNQAFLGGTADNGLGVALLYSGVKGADYRDGNNDNDIDDVLLKTHW
QLTDSDQLAANFHYYDAYADMPGGLTQAQYDDDPYQSLRDWDNFRGRRKDFSLKYIRQVDDLTRFELLTYYSDSFRGSRI
AARNLRTITSYPRDYHVFAVEPRVSRIFFAGPTTQEVSVGYRYLKEAMNERASQLALVDNVPTVRPGADGHTYQDRTGGT
EASAFYIDDRIDVGNWTITPGIRFEKIDSDWRERPVLGLNGRPVQEKKRSKDYNEPLPALSLMYHLSDEWKLFANYSESF
GSLQYFQLGQGGSGNDTAAGLEPEKAKTYELGTRYDNGSWGGEITLFYIDFDDELQYVSNDVGWTNLGATKHQGIETSGH
YDFAALDPRLDGLSVYGSLTYTRATYEGDLPSFKGRDLPLYSRRVATAGLRYEVERWTYNLDAFAQSMQRAPGLSTDSQG
NFTHNYITEPSGDGQYGDIPGYVTWNARVGYDFGPQASNLKLGLGVKNLFDKQYFTRSSDNNSGIYVGQPRTLFMQASVG
F

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
fecA AAL08456.2 FecA Not tested SRL Protein 4e-134 44

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
PSPA7_1853 YP_001347236.1 TonB-dependent receptor VFG1047 Protein 2e-134 44