|
Name : clpB (PSPA7_5181) Accession : YP_001350513.1 Strain : Pseudomonas aeruginosa PA7 Genome accession: NC_009656 Putative virulence/resistance : Virulence Product : ATP-dependent chaperone ClpB Function : - COG functional category : O : Posttranslational modification, protein turnover, chaperones COG ID : COG0542 EC number : - Position : 5326209 - 5328773 bp Length : 2565 bp Strand : - Note : Annotation was generated automatically without manual curation; identified by match to protein family HMM PF00004; match to protein family HMM PF02861; match to protein family HMM PF07724; match to protein family HMM PF07728; match to protein family HMM T DNA sequence : ATGCGAATAGACCGTTTGACCAGCAAGCTGCAACTCGCGCTCTCCGACGCCCAGTCCTTGGCCGTCGGCCACGACCACCC GGCCATCGAGCCGGTGCATCTGCTTTCCGCCCTGCTCGAACAGCAAGGCGGCTCGATCAAGCCCCTGCTGATGCAGGTCG GCTTCGATATCGCCGCCCTGCGCAGCGGCCTCAACAAGGAACTCGACGCGCTGCCGAAGATCCAGAGCCCGACCGGCGAC GTGAACCTGTCCCAGGACCTCGCGCGCCTGCTCAATCAGGCTGACCGCCTGGCCCAGCAGAAGGGCGACCAGTTCATCTC CAGCGAGCTGGTATTGCTGGCCGCGATGGACGAGAACACCAGGCTCGGCAAGCTGCTGCTCGGCCAGGGCGTGTCACGCA AGGCGCTGGAGAATGCCGTGGCCAACCTGCGCGGCGGCGAAGCGGTGAACGACCCGAACGTCGAGGAGTCGCGCCAGGCG CTGGACAAGTACACCGTCGACATGACCAGGCGCGCCGAGGAAGGCAAGCTCGACCCGGTGATCGGTCGCGACGACGAGAT CCGCCGGACCATCCAGGTCCTGCAGCGGCGGACGAAGAACAACCCGGTGCTGATCGGCGAACCCGGTGTCGGCAAGACCG CCATCGTCGAAGGCCTGGCCCAGCGCATCATCAATGGCGAAGTGCCGGATGGCCTCAAGGACAAGCGCCTGCTGGCCCTG GACATGGGCGCGCTGATCGCCGGCGCAAAATTCCGCGGCGAATTCGAGGAACGACTGAAGGCGGTCCTCAACGAACTGGG CAAGCAGGAAGGGCGGGTCATCCTGTTCATCGACGAACTGCACACCATGGTCGGCGCCGGCAAGGCGGAAGGCGCCATGG ATGCCGGCAACATGCTCAAGCCGGCTCTGGCGCGAGGCGAACTGCACTGCGTCGGCGCCACCACCCTCGACGAGTATCGC CAGTACATCGAGAAGGACGCCGCCCTGGAACGCCGCTTCCAGAAGGTGCTGGTGGACGAGCCGAGCGAGGAAGACACCAT CGCCATCCTCCGTGGCCTCAAGGAGCGCTACGAGGTGCACCACGGGGTGAGCATCACCGACGGCGCGATCATCGCCGCCG CCAAGCTGTCGCACCGCTACATCACCGACCGGCAGTTGCCGGACAAGGCCATCGACCTGATCGACGAGGCCGCCAGCCGC ATCCGCATGGAGATCGACTCCAAGCCGGAGGAACTGGATCGTCTCGACCGTCGCCTGATCCAGCTGAAGATCGAGCGCGA GGCGCTGAAGAAGGAAGACGACGAAGCCACCAGGAAGCGCCTGGCCAAGCTGGAAGAGGACATCGTCAAGCTGGAACGCG AGTACGCCGACCTGGAAGAGATCTGGAAGTCGGAGAAGGCCGAGGTACAGGGTTCGGCGCAGATCCAGCAGAAGATCGAG CAGGCCAAGCAGGAAATGGAGGCGGCGCGGCGCAAGGGCGACCTGGAAAGCATGGCGCGCATCCAGTACCAGACCATCCC GGACCTGGAACGCAGCCTGCAGATGGTCGACCAGCACGGCAAGACCGAGAACCAGTTGCTGCGCAACAAGGTGACCGACG AGGAAATCGCCGAGGTGGTCTCCAAGTGGACCGGTATCCCGGTGTCGAAGATGCTCGAGGGCGAGCGCGAGAAGCTGCTG CGCATGGAGCAGGAACTGCATCGCCGGGTCATCGGCCAGGACGAGGCGGTGGTCGCCGTGTCCAATGCGGTGCGCCGTTC GCGCGCCGGCCTGGCCGATCCGAACCGGCCCAGCGGCTCGTTCCTCTTCCTCGGCCCGACCGGGGTGGGCAAGACCGAGC TGTGCAAGGCGCTGGCCGAGTTCCTCTTCGATACCGAGGAGGCGCTGGTGCGGATCGACATGTCCGAGTTCATGGAGAAA CACTCCGTGGCTCGCCTGATCGGCGCGCCTCCGGGCTACGTCGGTTTCGAGGAGGGCGGCTACCTGACCGAGGCGATCCG CCGCAAGCCGTATTCGGTGGTGCTGCTGGACGAAGTGGAGAAGGCCCACCCGGACGTCTTCAACATTCTCCTGCAGGTAC TCGAGGATGGCCGCCTGACCGACAGCCACGGGCGCACCGTGGATTTCCGCAACACCGTGGTGGTGATGACCTCCAACCTC GGCTCGGCGCAGATCCAGGAACTCGCCGGTGACCGCGAGGCGCAGCGTGCCGCGGTGATGGATGCGGTCAACGCGCATTT CCGTCCGGAATTCATCAACCGGATCGATGAAGTGGTGGTGTTCGAACCGCTGGCACGTGAGCAGATCGCCGGCATCGCCG AGATCCAGCTTGGCCGCCTGCGCAAGCGGCTGGCCGAGCGCGAGCTGAGCCTGGACTTGAGTCAGGAGGCACTGGACAAG CTGATCGCCGTCGGCTTCGACCCGGTCTACGGTGCGCGTCCGCTGAAGCGGGCAATCCAGCGCTGGATCGAGAACCCGCT GGCGCAACTGATCTTGGCCGGCAAGTTCGCGCCGGGGACGAAGGTCTCGGCGAAGGTGGACGGCGACGAGATCGTGTTCG CCTGA Protein sequence : MRIDRLTSKLQLALSDAQSLAVGHDHPAIEPVHLLSALLEQQGGSIKPLLMQVGFDIAALRSGLNKELDALPKIQSPTGD VNLSQDLARLLNQADRLAQQKGDQFISSELVLLAAMDENTRLGKLLLGQGVSRKALENAVANLRGGEAVNDPNVEESRQA LDKYTVDMTRRAEEGKLDPVIGRDDEIRRTIQVLQRRTKNNPVLIGEPGVGKTAIVEGLAQRIINGEVPDGLKDKRLLAL DMGALIAGAKFRGEFEERLKAVLNELGKQEGRVILFIDELHTMVGAGKAEGAMDAGNMLKPALARGELHCVGATTLDEYR QYIEKDAALERRFQKVLVDEPSEEDTIAILRGLKERYEVHHGVSITDGAIIAAAKLSHRYITDRQLPDKAIDLIDEAASR IRMEIDSKPEELDRLDRRLIQLKIEREALKKEDDEATRKRLAKLEEDIVKLEREYADLEEIWKSEKAEVQGSAQIQQKIE QAKQEMEAARRKGDLESMARIQYQTIPDLERSLQMVDQHGKTENQLLRNKVTDEEIAEVVSKWTGIPVSKMLEGEREKLL RMEQELHRRVIGQDEAVVAVSNAVRRSRAGLADPNRPSGSFLFLGPTGVGKTELCKALAEFLFDTEEALVRIDMSEFMEK HSVARLIGAPPGYVGFEEGGYLTEAIRRKPYSVVLLDEVEKAHPDVFNILLQVLEDGRLTDSHGRTVDFRNTVVVMTSNL GSAQIQELAGDREAQRAAVMDAVNAHFRPEFINRIDEVVVFEPLAREQIAGIAEIQLGRLRKRLAERELSLDLSQEALDK LIAVGFDPVYGARPLKRAIQRWIENPLAQLILAGKFAPGTKVSAKVDGDEIVFA |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| aec27 | YP_851418.1 | ATPase | Not tested | PAI II APEC-O1 | Protein | 3e-104 | 41 |
| aec27 | AAQ96721.1 | Aec27 | Not tested | AGI-1 | Protein | 2e-104 | 41 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| clpB | YP_001350513.1 | ATP-dependent chaperone ClpB | VFG2076 | Protein | 2e-117 | 44 |
