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Name : PSPA7_5619 (PSPA7_5619) Accession : YP_001350940.1 Strain : Pseudomonas aeruginosa PA7 Genome accession: NC_009656 Putative virulence/resistance : Virulence Product : RNA polymerase sigma factor Function : - COG functional category : K : Transcription COG ID : COG1595 EC number : - Position : 5782239 - 5782775 bp Length : 537 bp Strand : - Note : Bacteria have multiple sigma factors which are active under specific conditions; the sigma factor binds with the catalytic core of RNA polymerase to produce the holoenzyme and directs bacterial core RNA polymerase to specific promoter elements to initiate DNA sequence : ATGAATGCACCGAGCCCCTGTCTTTCCGCTGACCGCGGCAGCGTCGCCACGCTGTACCTCGAAAACCACGCCTGGCTGCG CGGCTGGCTGGCCTACCGGCTACGTTCCTGGGGCCGCGAGGTGGCGGACGACCTGGCCCAGGACACCTTCCTGCGCATCC TCGCCAGCCACGACGCCGCGCAGCGCGAGGCGATCCGCCAGCCACGCGCCTACCTGACGCGCATCGCCACCTGCGTGCTG GTCAGCTGGCGACGCCGCCAGTCGCTGGAACTCGCCTGGCTCGAGGCCCTGGCCACGCTGCCCGAGCCGTTGCAGCCGTC GCCGGAGCAGCAGAGCGTGATCGTCGAGACCCTGCACGAGATCGACGCGCTGCTCGACACCCTGCGCCCGCGGGTGAAAC AGGCATTCCTGATGGCGACCCTGGACGGCATGAGGCAGAAGGACATCGCCGAGGCGCTGGACGTGGCGCTGCCGACGGTG AAGAAATACATCCACCAGGGCTTCCTGACCTGCCTGAGCTTGATGCCCGATGACTGA Protein sequence : MNAPSPCLSADRGSVATLYLENHAWLRGWLAYRLRSWGREVADDLAQDTFLRILASHDAAQREAIRQPRAYLTRIATCVL VSWRRRQSLELAWLEALATLPEPLQPSPEQQSVIVETLHEIDALLDTLRPRVKQAFLMATLDGMRQKDIAEALDVALPTV KKYIHQGFLTCLSLMPDD |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| unnamed | AAL08458.1 | FecI | Virulence | SRL | Protein | 4e-18 | 43 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| PSPA7_5619 | YP_001350940.1 | RNA polymerase sigma factor | VFG1049 | Protein | 2e-18 | 43 |
