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Name : secD (mma_0353) Accession : YP_001352043.1 Strain : Janthinobacterium sp. Marseille Genome accession: NC_009659 Putative virulence/resistance : Unknown Product : preprotein translocase subunit SecD Function : - COG functional category : U : Intracellular trafficking, secretion and vesicular transport COG ID : COG0342 EC number : - Position : 394476 - 396335 bp Length : 1860 bp Strand : + Note : - DNA sequence : ATGAATCGCTATCCCCTCTGGAAGTACATTATTATCGCTGTCGCACTCCTGTTAGGCGTGTTGTACACCCTGCCGAACTT CTTCGGCGAGTCGCCAGCGGTACAAATCAGCAGTGCCAAAGCCACCGTCAAGGTGGACAGTTCCCTGATGAGTCAGGTTG AGCAGGCGCTGAAAAAAGACGGTATCCAATACGACGGGATAGTCTATGAAACGATAGGTACGCAAGGTACCGTCCGTGTT CGTTTCCCTAATACCGATATCCAGTTCAAGGCCAAAGGCATACTGGAAAAAGACCTGAACACCGATCCGGAAGATCCGAC CTATCTGGTGGCCTTCAATCTGTTGCCGAATACGCCAGGCTGGTTGCAAAGCCTGAATGCGGCGCCTATGTACCTCGGCC TCGATTTGCGCGGTGGTGTGCACTTCCTGATGCAAGTCGATACCAAAGCGGTGATGAACAAGCGCGTGCTCGGTTTGCAA GCCAGCGCCCGCAGCATCTTGCGCGACAAGAATATCCGCCATGCCGGTATTTCGCGTAGTGGCGACAGTGTAGAAATCCT GTTCCGTGACGCAGATACCCGCAATAAGGCGCGTACCGTACTGACTAATGAATTGCGTGAACTGGTATTGACCGACGCCG GTAGCGGTGAAGACCTGAAGCTGGTGGGCGCATTGAACCCGACAGCATTGAAACAGACGGTAGAAGATGCAGTCCAGCAA AACATCACCACCTTGTCCAAGCGTGTGAATGAACTGGGTGTGACCGAGCCATTGATCCAGCGCCAGGGTGCGGATCGTAT CGTGGTGCAAATGCCGGGCGTGCAAGACGTATCGCGTGCGAAAGACATCATCGGTAAAACAGCAACGCTGGAAGTCCGCC TGGTAGATGAAACAGTCACCCGCGGTACCGAAGAAACTGCAGCGATTCCATTTGGCTCAGAACTGTTCAAAGTCGGCAAG AATGCTCCTGTCGTCTTGTACAAGGATCCGATCATCACCGGTGAGTACATTTCCAGCGCTTCGGCCAGCTTCGACCAAAA TCACCAGCCTTCGGTCAGCATCGACCTGAACGGCGATGGCGGTCGTCGCATGCGTGAAGCGACCCGTACCCGGGTCGGTA AGGCAATGGCGATTGTGCTGTTTGAAAAGAACAAGGGTGAAGTCCTGACCGTCGCGACTATCCGTGACGAACTGGGTGCA CGCTTCCAGATCACCGGCATGGGTTCGGCCGAAGCGGCAAGTGACCTGGCCTTGCTGTTGCGTGCAGGTTCGCTGGCGGC ACCGATGGAAATCATCGAAGAACGTACGATCGGACCGCAACTTGGTGCTGAAAACATTACCAAGGGCTTCGATGCAACGC TGTACGGTTTCATCGCCATCGGCATCTTCATGATCATTTACTACCGTGCATTCGGTTTCTTCAGCGTGTTTGCGCTGGCG GTCAACCTGATGTTGCTGATTGCCTTGTTGTCCTTGTTACAGGCAACGCTGACACTGCCGGGTATTGCCGCGATTGCGCT GACACTGGGTATGGCGATTGACGCCAACGTGCTGATTAACGAGCGGATACGCGAAGAGTTGCGTGCCGGGCATTCACCGC AAACAGCGATTTCGATGGGCTTCGAACGTGCATGGGCAACCATTCTGGATTCGAACGTTACCACCATGATTGCCGGCCTG GCGCTGCTGATTTTTGGTTCCGGTGCGGTGCGTGGTTTCGCGGTGGTGCATTGCCTGGGTATCTTGACCTCGATTTTCTC CGCCGTGTTCGTATCACGTGGCGTCGTCAATCTCTGGTACGGCCGCAAGAAGAAACTGACATCGGTATCCATCGGCCAGG TCTGGAAACCCGCTGACTGA Protein sequence : MNRYPLWKYIIIAVALLLGVLYTLPNFFGESPAVQISSAKATVKVDSSLMSQVEQALKKDGIQYDGIVYETIGTQGTVRV RFPNTDIQFKAKGILEKDLNTDPEDPTYLVAFNLLPNTPGWLQSLNAAPMYLGLDLRGGVHFLMQVDTKAVMNKRVLGLQ ASARSILRDKNIRHAGISRSGDSVEILFRDADTRNKARTVLTNELRELVLTDAGSGEDLKLVGALNPTALKQTVEDAVQQ NITTLSKRVNELGVTEPLIQRQGADRIVVQMPGVQDVSRAKDIIGKTATLEVRLVDETVTRGTEETAAIPFGSELFKVGK NAPVVLYKDPIITGEYISSASASFDQNHQPSVSIDLNGDGGRRMREATRTRVGKAMAIVLFEKNKGEVLTVATIRDELGA RFQITGMGSAEAASDLALLLRAGSLAAPMEIIEERTIGPQLGAENITKGFDATLYGFIAIGIFMIIYYRAFGFFSVFALA VNLMLLIALLSLLQATLTLPGIAAIALTLGMAIDANVLINERIREELRAGHSPQTAISMGFERAWATILDSNVTTMIAGL ALLIFGSGAVRGFAVVHCLGILTSIFSAVFVSRGVVNLWYGRKKKLTSVSIGQVWKPAD |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| secD | AAT96103.1 | SecD | Not tested | T-PAI | Protein | 2e-93 | 43 |
| secD | AAT96179.1 | SecD | Not tested | T-PAI | Protein | 3e-93 | 43 |
| secD | AAT96039.1 | SecD | Not tested | T-PAI | Protein | 2e-93 | 43 |
| secD | AAT96067.1 | SecD | Not tested | T-PAI | Protein | 2e-93 | 43 |
| secD | AAT96119.1 | SecD | Not tested | T-PAI | Protein | 2e-93 | 43 |
