Name : ccmF (mma_0941) Accession : YP_001352631.1 Strain : Janthinobacterium sp. Marseille Genome accession: NC_009659 Putative virulence/resistance : Unknown Product : cytochrome C-type biogenesis protein CcmF Function : - COG functional category : O : Posttranslational modification, protein turnover, chaperones COG ID : COG1138 EC number : - Position : 1064734 - 1066701 bp Length : 1968 bp Strand : - Note : - DNA sequence : ATGATCCCTGAACTTGGACTGTTGGCCCTGATCCTTGCGCTATGCCTCGCTCTAGTGCAAGCCAGCATTCCACTGATCGG TGCCTGGCGCGGCGACCGACACTGGATGGGACTAGCAAAACCGGCTGCCTGGGGCCAACTTACCTTCTTATTGTTCTCAT TCGCCTGTTTGTCCAATGCATTCCTGACCGACGACTTCTCGGTTGCATATGTTGCACACAACTCCAACAGCATGCTGCCT TGGTACTACAAATTCAGCGCGATCTGGGCCGCGCATGAGGGTTCATTGCTACTGTGGGTCTTGATATTGGCCGGTTGGAC ATCCGCTGTCTCGTTCGGTGCCAAGCAACTACCGGAGGCGATGCTGGCACGGGTTCTGGCCGTGATGGGCATGATCAGTA CTGGTTTCCTGCTATTCCTCATCAGCACCTCCAATCCCTTCGTCCGCTTGCTGTCCAATATCCCCGCTGATGGCCGCGAT CTTAATCCTCTCCTGCAGGACATAGGCTTAATCGTCCATCCACCCATACTCTACATGGGCTACGTCGGCTTCTCGGTGGC TTTCGCCTTCGCCATCGCGGCTCTGTTGGACGGCAAGGTTGACGCCGCTTGGGCACGCTGGTCTCGACCTTGGACAACTG TGGCTTGGGCGTTTCTCGGCTTGGGCATCGCCCTAGGGTCGTGGTGGGCTTATTCTGAACTAGGTTGGGGCAGTTGGTGG TTCTGGGATCCCGTCGAGAATGCGTCGTTCATGCCGTGGCTGGTGGGGGCAGCACTGATCCATTCCTTAGCTGCAACTGA AAAACGCGGCGTGTTCAAAAGTTGGACCGTACTGCTTGCCATTTCCGCGTTCTCACTCAGCTTATTAGGCACCTTCCTGG TTCGATCAGGAGTACTGACCTCCGTGCACGCTTTTGCCACTGACCCTGCACGTGGCGTGTTTGTGTTGGTGTTGTTGCTA GCAGTGGTTGGTGGCTCGCTTGCATTATTCGCACTGCGGGCTCCAGTAATCAAGAGTCAGGTCAGCTTCGGAATACTGTC GCGTGAGACGTTACTGTTGGTAAACAATCTGCTGCTGTCGGTAGCAGCGGCCATGATCCTGCTCGGCACGCTCTATCCCA TGATTCTTGACGCGTTTACTGGAGCAAAACTATCGGTCGGCCCCCCTTACTTTAACGCCATGTTCGTGCCGTTGATGGCG CTACTAATGGTGGCAGTGGCAGTCGGTATGCTCACGCGTTGGAAAGATACGTCGGGGCGCTGGCTGGCACGCATGCTCGT CCCGGTGCTGGCTGTCAGTCTACTAATCGCACTAGGCGCTGCTACGCTGCATGACCGATCGCGTTGGGCAGTGATGGGGG TCTGTCTGTTGGCTGCTTGGGTCGTGCTGACGGGCCTGCGCGACATATTCGACAAGACTCGCCACATGGGGTTGTTCAAG GGTTTGTCGATGCTAGGCAACAGCTATTGGGGTATGCATCTAGCCCATCTGGGTTTCGCCGTGTGTGCTCTAGGTGCTGT GCTGACTACCGTCGGAAGCCTTGAACGAAATCTGCGCATGATGCCCGGTACAGCCATCGAGTTAGGCGGCTACCACTTCA TATTCGAAGGAACAACCCGACTCCAGGGACCCAATTACGTTGCCGACTACGGCAATGTACGGGTTCTTCGCGACGGCACT GAGATCGCGTTGCTACACCCTGAAAAACGTGTTTACCACGTTCAGCAAACCTCCATGACCGAGGCAGGGATTCAAGCTGG CTTCACACGTGACCTCTTCGTGGCGTTGGGCGAACCACTAACTGACGGCGCTTGGGCGGTGCGAGTGCAGATCAAGCCGT TCGTACGCTGGATCTGGCTGGGTGCACTACTTATGACCCTGGGCGGCTTGCTAGCAGCGACTGACTGGCGCTATCGCAGA GGATCTCGACTGGCTCCAGACACGCGCATGGTCGGAGAACAACCATGA Protein sequence : MIPELGLLALILALCLALVQASIPLIGAWRGDRHWMGLAKPAAWGQLTFLLFSFACLSNAFLTDDFSVAYVAHNSNSMLP WYYKFSAIWAAHEGSLLLWVLILAGWTSAVSFGAKQLPEAMLARVLAVMGMISTGFLLFLISTSNPFVRLLSNIPADGRD LNPLLQDIGLIVHPPILYMGYVGFSVAFAFAIAALLDGKVDAAWARWSRPWTTVAWAFLGLGIALGSWWAYSELGWGSWW FWDPVENASFMPWLVGAALIHSLAATEKRGVFKSWTVLLAISAFSLSLLGTFLVRSGVLTSVHAFATDPARGVFVLVLLL AVVGGSLALFALRAPVIKSQVSFGILSRETLLLVNNLLLSVAAAMILLGTLYPMILDAFTGAKLSVGPPYFNAMFVPLMA LLMVAVAVGMLTRWKDTSGRWLARMLVPVLAVSLLIALGAATLHDRSRWAVMGVCLLAAWVVLTGLRDIFDKTRHMGLFK GLSMLGNSYWGMHLAHLGFAVCALGAVLTTVGSLERNLRMMPGTAIELGGYHFIFEGTTRLQGPNYVADYGNVRVLRDGT EIALLHPEKRVYHVQQTSMTEAGIQAGFTRDLFVALGEPLTDGAWAVRVQIKPFVRWIWLGALLMTLGGLLAATDWRYRR GSRLAPDTRMVGEQP |
Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
ccmF | AAN62106.1 | putative cytochrome C-type biogenesis protein CcmF | Not tested | PAGI-2(C) | Protein | 8e-127 | 57 |
ccmF | YP_217241.1 | cytochrome c-type biogenesis protein | Not tested | SPI-12 | Protein | 9e-111 | 52 |