Gene Information

Name : ccmF (mma_0941)
Accession : YP_001352631.1
Strain : Janthinobacterium sp. Marseille
Genome accession: NC_009659
Putative virulence/resistance : Unknown
Product : cytochrome C-type biogenesis protein CcmF
Function : -
COG functional category : O : Posttranslational modification, protein turnover, chaperones
COG ID : COG1138
EC number : -
Position : 1064734 - 1066701 bp
Length : 1968 bp
Strand : -
Note : -

DNA sequence :
ATGATCCCTGAACTTGGACTGTTGGCCCTGATCCTTGCGCTATGCCTCGCTCTAGTGCAAGCCAGCATTCCACTGATCGG
TGCCTGGCGCGGCGACCGACACTGGATGGGACTAGCAAAACCGGCTGCCTGGGGCCAACTTACCTTCTTATTGTTCTCAT
TCGCCTGTTTGTCCAATGCATTCCTGACCGACGACTTCTCGGTTGCATATGTTGCACACAACTCCAACAGCATGCTGCCT
TGGTACTACAAATTCAGCGCGATCTGGGCCGCGCATGAGGGTTCATTGCTACTGTGGGTCTTGATATTGGCCGGTTGGAC
ATCCGCTGTCTCGTTCGGTGCCAAGCAACTACCGGAGGCGATGCTGGCACGGGTTCTGGCCGTGATGGGCATGATCAGTA
CTGGTTTCCTGCTATTCCTCATCAGCACCTCCAATCCCTTCGTCCGCTTGCTGTCCAATATCCCCGCTGATGGCCGCGAT
CTTAATCCTCTCCTGCAGGACATAGGCTTAATCGTCCATCCACCCATACTCTACATGGGCTACGTCGGCTTCTCGGTGGC
TTTCGCCTTCGCCATCGCGGCTCTGTTGGACGGCAAGGTTGACGCCGCTTGGGCACGCTGGTCTCGACCTTGGACAACTG
TGGCTTGGGCGTTTCTCGGCTTGGGCATCGCCCTAGGGTCGTGGTGGGCTTATTCTGAACTAGGTTGGGGCAGTTGGTGG
TTCTGGGATCCCGTCGAGAATGCGTCGTTCATGCCGTGGCTGGTGGGGGCAGCACTGATCCATTCCTTAGCTGCAACTGA
AAAACGCGGCGTGTTCAAAAGTTGGACCGTACTGCTTGCCATTTCCGCGTTCTCACTCAGCTTATTAGGCACCTTCCTGG
TTCGATCAGGAGTACTGACCTCCGTGCACGCTTTTGCCACTGACCCTGCACGTGGCGTGTTTGTGTTGGTGTTGTTGCTA
GCAGTGGTTGGTGGCTCGCTTGCATTATTCGCACTGCGGGCTCCAGTAATCAAGAGTCAGGTCAGCTTCGGAATACTGTC
GCGTGAGACGTTACTGTTGGTAAACAATCTGCTGCTGTCGGTAGCAGCGGCCATGATCCTGCTCGGCACGCTCTATCCCA
TGATTCTTGACGCGTTTACTGGAGCAAAACTATCGGTCGGCCCCCCTTACTTTAACGCCATGTTCGTGCCGTTGATGGCG
CTACTAATGGTGGCAGTGGCAGTCGGTATGCTCACGCGTTGGAAAGATACGTCGGGGCGCTGGCTGGCACGCATGCTCGT
CCCGGTGCTGGCTGTCAGTCTACTAATCGCACTAGGCGCTGCTACGCTGCATGACCGATCGCGTTGGGCAGTGATGGGGG
TCTGTCTGTTGGCTGCTTGGGTCGTGCTGACGGGCCTGCGCGACATATTCGACAAGACTCGCCACATGGGGTTGTTCAAG
GGTTTGTCGATGCTAGGCAACAGCTATTGGGGTATGCATCTAGCCCATCTGGGTTTCGCCGTGTGTGCTCTAGGTGCTGT
GCTGACTACCGTCGGAAGCCTTGAACGAAATCTGCGCATGATGCCCGGTACAGCCATCGAGTTAGGCGGCTACCACTTCA
TATTCGAAGGAACAACCCGACTCCAGGGACCCAATTACGTTGCCGACTACGGCAATGTACGGGTTCTTCGCGACGGCACT
GAGATCGCGTTGCTACACCCTGAAAAACGTGTTTACCACGTTCAGCAAACCTCCATGACCGAGGCAGGGATTCAAGCTGG
CTTCACACGTGACCTCTTCGTGGCGTTGGGCGAACCACTAACTGACGGCGCTTGGGCGGTGCGAGTGCAGATCAAGCCGT
TCGTACGCTGGATCTGGCTGGGTGCACTACTTATGACCCTGGGCGGCTTGCTAGCAGCGACTGACTGGCGCTATCGCAGA
GGATCTCGACTGGCTCCAGACACGCGCATGGTCGGAGAACAACCATGA

Protein sequence :
MIPELGLLALILALCLALVQASIPLIGAWRGDRHWMGLAKPAAWGQLTFLLFSFACLSNAFLTDDFSVAYVAHNSNSMLP
WYYKFSAIWAAHEGSLLLWVLILAGWTSAVSFGAKQLPEAMLARVLAVMGMISTGFLLFLISTSNPFVRLLSNIPADGRD
LNPLLQDIGLIVHPPILYMGYVGFSVAFAFAIAALLDGKVDAAWARWSRPWTTVAWAFLGLGIALGSWWAYSELGWGSWW
FWDPVENASFMPWLVGAALIHSLAATEKRGVFKSWTVLLAISAFSLSLLGTFLVRSGVLTSVHAFATDPARGVFVLVLLL
AVVGGSLALFALRAPVIKSQVSFGILSRETLLLVNNLLLSVAAAMILLGTLYPMILDAFTGAKLSVGPPYFNAMFVPLMA
LLMVAVAVGMLTRWKDTSGRWLARMLVPVLAVSLLIALGAATLHDRSRWAVMGVCLLAAWVVLTGLRDIFDKTRHMGLFK
GLSMLGNSYWGMHLAHLGFAVCALGAVLTTVGSLERNLRMMPGTAIELGGYHFIFEGTTRLQGPNYVADYGNVRVLRDGT
EIALLHPEKRVYHVQQTSMTEAGIQAGFTRDLFVALGEPLTDGAWAVRVQIKPFVRWIWLGALLMTLGGLLAATDWRYRR
GSRLAPDTRMVGEQP

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
ccmF AAN62106.1 putative cytochrome C-type biogenesis protein CcmF Not tested PAGI-2(C) Protein 8e-127 57
ccmF YP_217241.1 cytochrome c-type biogenesis protein Not tested SPI-12 Protein 9e-111 52