|
Name : Shew185_0231 (Shew185_0231) Accession : YP_001364465.1 Strain : Shewanella baltica OS185 Genome accession: NC_009665 Putative virulence/resistance : Unknown Product : cytochrome c-type biogenesis protein CcmF Function : - COG functional category : O : Posttranslational modification, protein turnover, chaperones COG ID : COG1138 EC number : - Position : 265945 - 267924 bp Length : 1980 bp Strand : + Note : TIGRFAM: cytochrome c-type biogenesis protein CcmF; PFAM: cytochrome c assembly protein; KEGG: sbl:Sbal_0231 cytochrome c-type biogenesis protein CcmF DNA sequence : ATGATCCCAGAACTTGGACACTTTGCGCTGATAATAGGGGTGGCTTTTGCATTCTTATTAATCAGCGTCCCCCTAATAGG TGTTGCCCGTAAAGATCAATACCTTGTTAGGTATGCTTGGCCGTTAACGTACGGAATGTTCTTTTTTATCACTGTATCAG TTGTCGTGCTGGCCTATAGCTTTGCCGTCGATGATTTCTCAGTCGCTTATGTGGCACATCATTCTAATTCTCAGTTACCT ATCTTCTTTAAGATTTCGGCCGTATGGGGCGGTCATGAAGGGTCACTGTTGTTCTGGGTGTTTGCTTTATCGACTTGGGC TGCAGCGGTTGCCTTATTTAGTAAAGGTTTAGAGGAAGTGTTTACTGCGCGTGTACTGGCAGTATTAGCACTGATCGTGA TTGGCTTTAGCTTATTCATGCTACTCACCTCTAGCCCATTCGAACGTTTGTTCCCGATCCCTGCCGAAGGTCGTGACTTA AACCCTATGCTGCAGGATGTGGGGTTAATCTTCCATCCACCTATGCTGTATTTAGGTTATGTGGGTTTCTCGGTGAGCTT TGCATTTGCGATTGCCGCGCTGATGAGCGGTCGTCTCGATTCTGCATGGGCTCGTTGGACTCGTCCTTGGACCTTAGCCG CTTGGATCTTCCTAACTGGAGGTATCGCGCTAGGTTCTTGGTGGGCATATTATGAATTAGGCTGGGGCGGTTGGTGGTTC TGGGATCCTGTTGAGAACGCCTCTTTCATGCCTTGGTTAGTGGGTACTGCGCTTGTTCACTCTTTGATTGTGACCGAGAA ACGCGGCGCCTTCCGTAATTGGACCGTATTACTGTCTATATTCGCTTTCTCTTTAAGTTTGCTTGGTACCTTTATTGTTC GCTCAGGCGTATTAACCTCAGTACATTCATTCGCAGCCGATCCAAGCCGCGGTATGTTTATTCTGTTGTTACTTGGCTTA GCGATTGGCGGTTCATTAACACTGTTTGCCTTCCGCGCCAGTGAAATGAGCAGTCCAGCCCGTTTCGAGCTGAAGTCTAA AGAAACCATGCTATTGGTCTGTAACGTGTTACTGACTGTTGCCGCAGGTACTGTGCTATTGGGTACACTCTATCCATTGC TCATCGATGCACTCGGCATGGGTAAAATTTCTGTAGGACCTCCATACTTCAACGCTGTATTTGTGCCTATCGTATTAGTC TTATTTGGCTTTATGGGTATTGGTCCAATTATCCGTTGGAAAAAATCGAAAGCAGGCGAGCTTAGGCGTCAGCTATTGAT CCCTGCAATGATTGCTGCGGCTATCGGTATTGTGACGCCATTTATCGTCGATGGTGTATTCAATACTTGGGTTGCCTTTG GTATTGCAGCGGCTTCTTGGATTATCCTAGCGACAGCAAGAGCGGCCTATAACATGGTCAAGTCGAAAGAAGGTGATATC AGCATCAGCCGTATGGGCCGTAGTCAGCTGGGCATGATCTTCGCGCATCTTGGTATTGCTGTGTCTGTGATTGGTGCCAC TATGGTGTCGAATTACTCGATTGAGAAAAGTGTTCGCATGGGACCTGGTATTAGCCAAGAGCTTGCGGGTTATACCTTTA AGTATCTGGAGACCAAAAACGTAGTGGGTCCTAACTACACTGCAATGCAGGGACAGATAGAAGTCTACAAAGGTGATGAG CTGCTGACATTACTCAAGCCAGACCGTCGTCAATATAATGTGCGTACTATGGACATGACAGAAGCGGGTATCGACTGGGG TCTATTCCGTGACTTGTATGTGACCATGGGCGATCCAATTACCAGCACTGAATTTGCGGTTCGTTTGAACTACAAACCGT TCGTGCGTTGGTTATGGTTTGGGGCAATTTTCATGATGATTGGTGGATTCTTCGCGGCATCGGATAAACGTTACCGTGCG AAAGTCACTGCAGCTGTCGCGCCTTCGGCCGAAAAGGCAAAATTGGCAACGGCTCAATAA Protein sequence : MIPELGHFALIIGVAFAFLLISVPLIGVARKDQYLVRYAWPLTYGMFFFITVSVVVLAYSFAVDDFSVAYVAHHSNSQLP IFFKISAVWGGHEGSLLFWVFALSTWAAAVALFSKGLEEVFTARVLAVLALIVIGFSLFMLLTSSPFERLFPIPAEGRDL NPMLQDVGLIFHPPMLYLGYVGFSVSFAFAIAALMSGRLDSAWARWTRPWTLAAWIFLTGGIALGSWWAYYELGWGGWWF WDPVENASFMPWLVGTALVHSLIVTEKRGAFRNWTVLLSIFAFSLSLLGTFIVRSGVLTSVHSFAADPSRGMFILLLLGL AIGGSLTLFAFRASEMSSPARFELKSKETMLLVCNVLLTVAAGTVLLGTLYPLLIDALGMGKISVGPPYFNAVFVPIVLV LFGFMGIGPIIRWKKSKAGELRRQLLIPAMIAAAIGIVTPFIVDGVFNTWVAFGIAAASWIILATARAAYNMVKSKEGDI SISRMGRSQLGMIFAHLGIAVSVIGATMVSNYSIEKSVRMGPGISQELAGYTFKYLETKNVVGPNYTAMQGQIEVYKGDE LLTLLKPDRRQYNVRTMDMTEAGIDWGLFRDLYVTMGDPITSTEFAVRLNYKPFVRWLWFGAIFMMIGGFFAASDKRYRA KVTAAVAPSAEKAKLATAQ |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| ccmF | AAN62106.1 | putative cytochrome C-type biogenesis protein CcmF | Not tested | PAGI-2(C) | Protein | 3e-141 | 54 |
| ccmF | YP_217241.1 | cytochrome c-type biogenesis protein | Not tested | SPI-12 | Protein | 2e-122 | 50 |
