Gene Information

Name : Shew185_4231 (Shew185_4231)
Accession : YP_001368410.1
Strain : Shewanella baltica OS185
Genome accession: NC_009665
Putative virulence/resistance : Virulence
Product : ECF subfamily RNA polymerase sigma-24 factor
Function : -
COG functional category : K : Transcription
COG ID : COG1595
EC number : -
Position : 5045212 - 5045718 bp
Length : 507 bp
Strand : +
Note : TIGRFAM: RNA polymerase sigma-70; PFAM: sigma-70 region 2 domain protein; Sigma-70 region 4 type 2; KEGG: bur:Bcep18194_A5453 sigma-24 (FecI-like)

DNA sequence :

ATGACGTCGGTCAATATTTCTTCTCCTATCAATAACCTATATAGAGATAACCAGTTTTGGCTACGCGGCTGGCTATACTC
ACGCGTGGGTTGTTCAGAAACAGCGGCCGACCTAGCCCAAGATACATTTCTACGTTTGTTAAAAACCGGAAATCTACCGC
CTTCAGGCGAATCGCGGCGATTTTTAACTCGCATTGCCAAAGGATTGATGATTGATGCTTATCGTCGGCAGAAGATTGAA
GAAGCCTACCTAGAAAGTTTGAGCTTGATGCCAGAAACCTTCATTCCTGGGCCAGAGATCCATCATGTCATCATTGAAAC
ACTCGCTGAAATTGCCGTTATGCTCGATAACTTGCCGGATAATGTGCGCTTGACGCTGTTACTGCGCCAGATAGAGGGTT
TAAGCTATGCCGATATTGCTAAGCAACTATCAGTTTCTGTTTCATCGGTAGAAAAGTACGTTGCGCGAGGCTTAGCGGCC
TGCTGCCTCGCGCTGGAATCCTATTAG

Protein sequence :

MTSVNISSPINNLYRDNQFWLRGWLYSRVGCSETAADLAQDTFLRLLKTGNLPPSGESRRFLTRIAKGLMIDAYRRQKIE
EAYLESLSLMPETFIPGPEIHHVIIETLAEIAVMLDNLPDNVRLTLLLRQIEGLSYADIAKQLSVSVSSVEKYVARGLAA
CCLALESY

• Homologs from PAI DB

Gene	GenBank Accn	Product	Virulance or Resistance	PAI or REI	Alignment Type	E-val	Identity
unnamed	AAL08458.1	FecI	Virulence	SRL	Protein	5e-31	42

• Homologs from VFDB (virulence genes)

Gene	GenBank Accn	Product	ID of source DB	Alignment Type	E-val	Identity
Shew185_4231	YP_001368410.1	ECF subfamily RNA polymerase sigma-24 factor	VFG1049	Protein	2e-31	42