Gene Information

Name : Shew185_0833 (Shew185_0833)
Accession : YP_001365050.1
Strain : Shewanella baltica OS185
Genome accession: NC_009665
Putative virulence/resistance : Virulence
Product : ABC transporter-like protein
Function : -
COG functional category : V : Defense mechanisms
COG ID : COG1136
EC number : -
Position : 985061 - 985771 bp
Length : 711 bp
Strand : -
Note : PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: sbl:Sbal_3507 ABC transporter related

DNA sequence : 
ATGGCCGACGTCGCTAAACCAAATCCTGTCGACAAGCTTCACCCAGTCGCCAAGCTTAACCAAGTCAGCAAGTGCTTTCG
CGATGGCGAGCAATATCATCAAGTGCTGCAAGCGGTTGACCTGCAGATCCATAGAGGCGAAACCGTGGCGCTTACAGGTC
CCAGCGGCAGCGGCAAGAGCACCTTACTCAACCTGATCGCCGGCTTTGAAATGCCAGACTCGGGCGAAATCTTACTAGAA
CAAGCGTCCACCTCAACTTGGCAAGACAAAGATTGGAGCCGTTTCAGGCGCAATTCCTTAGGTGTCGTGTTTCAGCAATT
TAACTTACTCACGCCACTCAACGTGAAAGACAATATCGCCTTCTCCTTAAGTTTAACCGCGCAGCCGTGGTCAGCCTGGT
GTGACTATCTGGTTGAAAAACTTGGACTGATGCCATTACTTCACCGCCAAGTTGAAGCCCTGTCCGGCGGTCAACAACAG
CGCGTAGCCATCGCCCGCGCCTTAGCCCATAAACCGACGTTACTGCTGGCCGACGAACCCACAGGCAACTTAGATGATGT
ATCGGGTAAGCAAGTCATGGCATTACTGTGTGAACTGGCACGGGAAAGCCAAACCAGTATATTAATGGTCACCCACAGCG
AAGAGTGCGCCGCCTTTATGCAAAAACGTTGGCACTTATCCCAAGGTGCAGTCGCTATCTATGAACAATAA

Protein sequence : 
MADVAKPNPVDKLHPVAKLNQVSKCFRDGEQYHQVLQAVDLQIHRGETVALTGPSGSGKSTLLNLIAGFEMPDSGEILLE
QASTSTWQDKDWSRFRRNSLGVVFQQFNLLTPLNVKDNIAFSLSLTAQPWSAWCDYLVEKLGLMPLLHRQVEALSGGQQQ
RVAIARALAHKPTLLLADEPTGNLDDVSGKQVMALLCELARESQTSILMVTHSEECAAFMQKRWHLSQGAVAIYEQ

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
Cp1002_1464 YP_005681730.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 1e-23 41

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Shew185_0833 YP_001365050.1 ABC transporter-like protein CP001581.1.gene798.p Protein 5e-35 42
Shew185_0833 YP_001365050.1 ABC transporter-like protein NC_012469.1.7686878. Protein 6e-39 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Shew185_0833 YP_001365050.1 ABC transporter-like protein VFG2059 Protein 2e-19 41