Gene Information

Name : CLC_1422 (CLC_1422)
Accession : YP_001387287.1
Strain : Clostridium botulinum Hall
Genome accession: NC_009698
Putative virulence/resistance : Unknown
Product : major cold shock protein
Function : -
COG functional category : K : Transcription
COG ID : COG1278
EC number : -
Position : 1480013 - 1480216 bp
Length : 204 bp
Strand : -
Note : identified by match to protein family HMM PF00313

DNA sequence :
ATGAAAACTGGAACAGTAAAATGGTTTAACTCAGAAAAAGGATTTGGATTTATAGAAGTAGAAGGCGAAAAAGACGTATT
CGTTCACTTCTCAGCAATCCAAGGAGATGAGCCAAGAAAAAACCTTGAAGAAGGACAAAAAGTTCAATTCGAAGTAGAAG
AAGGTCAAAAAGGTCCTCAAGCTGCTAATGTTATAAAGCTATAA

Protein sequence :
MKTGTVKWFNSEKGFGFIEVEGEKDVFVHFSAIQGDEPRKNLEEGQKVQFEVEEGQKGPQAANVIKL

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
unnamed AAO18076.1 unknown Not tested TTSS locus Protein 2e-14 63
cspH YP_216241.1 cold shock protein-like protein Not tested SPI-11 Protein 0.005 41