Gene Information

Name : CLC_2059 (CLC_2059)
Accession : YP_001387906.1
Strain : Clostridium botulinum Hall
Genome accession: NC_009698
Putative virulence/resistance : Virulence
Product : glycyl-radical enzyme activating family protein
Function : -
COG functional category : O : Posttranslational modification, protein turnover, chaperones
COG ID : COG1180
EC number : 1.97.1.-
Position : 2183218 - 2184171 bp
Length : 954 bp
Strand : -
Note : identified by match to protein family HMM PF00037; match to protein family HMM PF04055; match to protein family HMM TIGR02494

DNA sequence :
ATGAGTAATGGAAATTTAGGTATAATCGAGAGAAAAGCAAGGATTTTTAATATACAAAAATATAATATGTATGATGGAGA
TGGAATAAGAACTTTAGTATTTTTTCAAGGATGTCCACTTAGATGTAAATGGTGTGCAAATCCTGAAGGACTAGAAAAAA
AATATAGAGTTATGCTTAAAAGTAATCTATGTGTAAATTGTGGAGCTTGTGTTTCTGCATGTCCTGTAGGAATCCATACT
ATTTCTAATAAAACTCTAAAGCATGAAGTTAATCGTGACATAGATTGTATAGGATGTGGAAAGTGTAAAGAAGCTTGTCT
TAAATCTGCTATATCAATAGTTGGAGAAGAAAAAACTATCTCTGAACTTTTAAAAATAGTAGAAGAAGATAGAACTTTTT
ATGAAATGTCCGGCGGTGGAGTTACATTAGGTGGTGGCGAAGTTTTAATGCAGCCTGAAGCTGCTACTAGTTTACTAATG
GCATGTAAGCAAGAAGGTATAAACACTGCAATTGAAACTTGTGGCTATACAAATCTTGAAACAATCCTTAAGGTTGCAGA
ATTTGTAGATCTATTCTTATTTGATATTAAAAATATTAATTCTGATAGACATCATGAATTAACTGGAGTAAGAAATGAGA
GGATTTTAGAAAATCTTCAAGAATTACTCAAGAAAAAATACAATGTAAAGATTCGTATGCCTTTACTTAAAGGTATAAAT
GATTCTCAAGATGAGATAGAAAAAACTATGGAATTTTTATTACCTTATAAAGATTATAAAAACTTTAAGGGAATTGATTT
ACTTCCTTATCATAAGATGGGGGTAAATAAATATAACCAATTAGGAATGGAATATCCTATAAAAGATGATCCAAGCCTTA
AAAGTGAAGATTTAGATAGAATAGAAGGATGGATTAAAAAATATGATTTACCTGTAAAGGTAATCCGCCATTAA

Protein sequence :
MSNGNLGIIERKARIFNIQKYNMYDGDGIRTLVFFQGCPLRCKWCANPEGLEKKYRVMLKSNLCVNCGACVSACPVGIHT
ISNKTLKHEVNRDIDCIGCGKCKEACLKSAISIVGEEKTISELLKIVEEDRTFYEMSGGGVTLGGGEVLMQPEAATSLLM
ACKQEGINTAIETCGYTNLETILKVAEFVDLFLFDIKNINSDRHHELTGVRNERILENLQELLKKKYNVKIRMPLLKGIN
DSQDEIEKTMEFLLPYKDYKNFKGIDLLPYHKMGVNKYNQLGMEYPIKDDPSLKSEDLDRIEGWIKKYDLPVKVIRH

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
unnamed CAD42072.1 hypothetical protein Not tested PAI II 536 Protein 2e-66 49

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
CLC_2059 YP_001387906.1 glycyl-radical enzyme activating family protein VFG1591 Protein 1e-66 49