Gene Information

Name : CLC_2062 (CLC_2062)
Accession : YP_001387909.1
Strain : Clostridium botulinum Hall
Genome accession: NC_009698
Putative virulence/resistance : Virulence
Product : microcompartments family protein
Function : -
COG functional category : Q : Secondary metabolites biosynthesis, transport and catabolism
COG ID : COG4577
EC number : -
Position : 2188456 - 2188764 bp
Length : 309 bp
Strand : -
Note : identified by match to protein family HMM PF00936

DNA sequence : 
ATGGCAAGATATGAAGCTTTAGGATTAATCGAAACTTTTGGTCTGGTTTTTGCTTTAGAAGCAGCAGACGCTATGTGCAA
ATCAGCAGATGTTGAACTTATAGGATATGAAAATGTTGCATCAGGTTATATATCTGTATTAGTTCGTGGTGATGTTGGTG
CTTGTAAAACAGCAGTAGATGCTGGTGTTGCAGCAGTTAATGGAATGGAAGGTGGAAACCTATATAGCTCAATAGTTATT
CCAAGACCACACGAAGATCTTGAAAAAATAATAAAACGTTATGCCATTACAGATATTATAACAGAATAG

Protein sequence : 
MARYEALGLIETFGLVFALEAADAMCKSADVELIGYENVASGYISVLVRGDVGACKTAVDAGVAAVNGMEGGNLYSSIVI
PRPHEDLEKIIKRYAITDIITE

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
unnamed CAD42078.1 hypothetical protein Not tested PAI II 536 Protein 2e-21 60
unnamed CAD42077.1 hypothetical protein Not tested PAI II 536 Protein 6e-19 60
unnamed CAD42079.1 hypothetical protein Not tested PAI II 536 Protein 2e-19 56

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
CLC_2062 YP_001387909.1 microcompartments family protein VFG1597 Protein 1e-21 60
CLC_2062 YP_001387909.1 microcompartments family protein VFG1596 Protein 3e-19 60
CLC_2062 YP_001387909.1 microcompartments family protein VFG1598 Protein 8e-20 56