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Name : CHAB381_1446 (CHAB381_1446) Accession : YP_001406985.1 Strain : Campylobacter hominis ATCC BAA-381 Genome accession: NC_009714 Putative virulence/resistance : Virulence Product : leukotoxin translocation ATP-binding protein LktB Function : - COG functional category : V : Defense mechanisms COG ID : COG2274 EC number : 3.6.3.43 Position : 1391084 - 1393183 bp Length : 2100 bp Strand : - Note : identified by match to protein family HMM PF00005; match to protein family HMM PF00664; match to protein family HMM PF03412; match to protein family HMM TIGR01846 DNA sequence : ATGCGAACTGCTCTGCAGGCGCTTGCACTTATTACTCAAATAAATAGAATTCCGTTTGATTCTAAAGAAATAATAAATAA ATTTGCATTGAATACAAACGAACCAAGCATTGACGAGCTTACAAGAATTGCAAAATATTTGGAATTTAAAGCAAAAATCA AAAATATATCTGAAATTTCAAAATATAAACCTCCTTTTATAGCACAATCCAAACAAAACACATATTTTGTAATTTTCCAA ATTTTAGAAGACGGATCATTTTTGATTTATGATGGCGGGAGCAGCTTAAAAAAGATAAACAAAGATGAGATGAATGAAAT TTCAAATTCCAAAATAATAGTTTTGGCTCATAAAGCTTTAAATTCTCAAGTCAAATTCGGCTTTGCATGGTTTTATAAAA AGATGCTGAAATTTAAATTTATAATTTTTGAAGTTTTACTAGCCTCTTTTATAATGCAGCTTTTTGGGCTTGTTACGCCG CTTTTTACACAAGTAGTTCTTGATAAGGTTTTAACTCATCATAGCATTAGCACTTTAAATGTTATCGCGGTAGCATTTTT CGCAGTTATTATTTTTGAAATGCTACTCTCTCTTACCAGAAATTATATATTTGCTCACACTACGACAAAAATTGATGCGC AGCTTGGAAGCGAACTGTTTTTGCACCTTTTATTGCTTCCGATGACATATTTTGAAAACAGAAAAGTAGGAAACATAGCG GCAAGAGTAAGAGAGTTAGATAGCATAAGAGATTTTATTGCAAACAAATCGGTTACCGTGCTGCTTGATCTTCTTTTTAG CTTTGTTTTTGTCATTATGATGCTACTTTACAGCGTAAAACTTACACTTATAGCAATAGCTTTTGTAAGTGTAATTGCTT TGATTTATTTTTTTATTACACCGATGCTAAGAGCAAGACTTAATGACAAATTTGAGATGGGAGCAAGGTCAAATTCTTAT TTGATAGAGTCAATCACTGGAATGCAAACCGTAAAATCTCTTGCAATTGAGGGTGGAATGCAAAGAAACTGGGAAGATTA TTTAGCAAAATATGTAAAATCAAGTTTTAATCTTTCGAATTTAAGCAATATCGCAAGTGGATTTGCAAACGCTCTTTCAA AGCTTATGACTTTATCTATTTTATATTTTGGTGTAGGGCTTGTAATAGAAGGAAAATTAAGCGTAGGCCAACTTATCGCT TTTCAAATGTTTGCAGGGCAATTTGCGTCTCCTGTAATGAGACTTGTAGGTCTTTGGAATGAATTTCAACAAGCGATTAT AAGTGTGGATAAATTAGGCGATATATTAAATACGCCGACTGAACAAACAACAAATAAACCGATAAGTTTAAATAAAGTAA GAGGTGAAATAAAATTTGAAAATGTAAGCTTTAGATACAACCCTGGTTCTAATTTGGTTCTTAAAAATTTAAGTTTTAAG ATAGATGCAAATAAAAGTGTAGGCATAGTAGGAAAAAGCGGAAGCGGCAAAAGCACGATTACAAAACTAATCGAAAGGCT TTATTTACAAAATGACGGTGCTATTTATATTGATGATATTGATATAAGACATCTCAATCCATATATTTTAAGGCAAAATA TAGGCGTAGTTTTACAAGAAAATTATCTTTTTAGCGGCACAATAAGAGAAAATATATCTTATGCAAAAGCCGACGCTTCT ATGGACGAGATCATAAAAGTAGCCAAAATATCTGGAGCGCACGATTTTATAAAAGAGCTTTCATCAGGATATGATACGAT AGTAGGAGAAAGAGGAAGCTCTCTTTCAGGCGGGCAAAAGCAAAGAATCGCGATAGCAAGAGCGATTATTTCCAACCCTA AAATTTTAATATTTGACGAAGCGACATCTGCGCTTGATTATGAAAGCGAAAAAGCAATAACTGAAAATTTAAATAAAATA AAAGAAAATAGAACATTCATCATCATCGCTCATAGACTTTCTACGATAAGAAATTGTGACGAAATAATAGTAATAGATAA AGGTGAAATTAAAGAACGCGGAAGCCACGATGAATTGGTAGCCAAAAATGGATATTATAAAAAATTGCTTGATGCACAAG CAGGGCTCAATCATGTTTAA Protein sequence : MRTALQALALITQINRIPFDSKEIINKFALNTNEPSIDELTRIAKYLEFKAKIKNISEISKYKPPFIAQSKQNTYFVIFQ ILEDGSFLIYDGGSSLKKINKDEMNEISNSKIIVLAHKALNSQVKFGFAWFYKKMLKFKFIIFEVLLASFIMQLFGLVTP LFTQVVLDKVLTHHSISTLNVIAVAFFAVIIFEMLLSLTRNYIFAHTTTKIDAQLGSELFLHLLLLPMTYFENRKVGNIA ARVRELDSIRDFIANKSVTVLLDLLFSFVFVIMMLLYSVKLTLIAIAFVSVIALIYFFITPMLRARLNDKFEMGARSNSY LIESITGMQTVKSLAIEGGMQRNWEDYLAKYVKSSFNLSNLSNIASGFANALSKLMTLSILYFGVGLVIEGKLSVGQLIA FQMFAGQFASPVMRLVGLWNEFQQAIISVDKLGDILNTPTEQTTNKPISLNKVRGEIKFENVSFRYNPGSNLVLKNLSFK IDANKSVGIVGKSGSGKSTITKLIERLYLQNDGAIYIDDIDIRHLNPYILRQNIGVVLQENYLFSGTIRENISYAKADAS MDEIIKVAKISGAHDFIKELSSGYDTIVGERGSSLSGGQKQRIAIARAIISNPKILIFDEATSALDYESEKAITENLNKI KENRTFIIIAHRLSTIRNCDEIIVIDKGEIKERGSHDELVAKNGYYKKLLDAQAGLNHV |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| hlyB | NP_755448.1 | hemolysin B | Virulence | PAI I CFT073 | Protein | 3e-115 | 46 |
| hlyB | CAD33760.1 | hemolysin B | Virulence | PAI I 536 | Protein | 1e-115 | 46 |
| hlyB | CAD42038.1 | HlyB protein | Virulence | PAI II 536 | Protein | 1e-115 | 46 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| CHAB381_1446 | YP_001406985.1 | leukotoxin translocation ATP-binding protein LktB | VFG1557 | Protein | 6e-116 | 46 |
| CHAB381_1446 | YP_001406985.1 | leukotoxin translocation ATP-binding protein LktB | VFG1501 | Protein | 6e-116 | 46 |
| CHAB381_1446 | YP_001406985.1 | leukotoxin translocation ATP-binding protein LktB | VFG0907 | Protein | 1e-115 | 46 |
| CHAB381_1446 | YP_001406985.1 | leukotoxin translocation ATP-binding protein LktB | VFG0841 | Protein | 9e-115 | 45 |
| CHAB381_1446 | YP_001406985.1 | leukotoxin translocation ATP-binding protein LktB | VFG1269 | Protein | 7e-120 | 43 |
