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Name : Plav_0941 (Plav_0941) Accession : YP_001412221.1 Strain : Parvibaculum lavamentivorans DS-1 Genome accession: NC_009719 Putative virulence/resistance : Unknown Product : cytochrome c-type biogenesis protein CcmF Function : - COG functional category : O : Posttranslational modification, protein turnover, chaperones COG ID : COG1138 EC number : - Position : 1010813 - 1012795 bp Length : 1983 bp Strand : + Note : TIGRFAM: cytochrome c-type biogenesis protein CcmF; PFAM: cytochrome c assembly protein; KEGG: rpc:RPC_1836 cytochrome c-type biogenesis protein CcmF DNA sequence : ATGATTGCTGAACTCGGCCATTTCGCGCTGGTGCTCGCGCTCGCGGTGTCGCTGGCGCAGATGGTCGTGCCGATGATCGG GGCGCAGCGGCGCGATGCAGCGCTGATGGCTGTGGCACAGCCGGCCGCCATTCTGCAGCTTGCCCTTGTCGGCTTCGCCT TCGCGGTCCTCGTATACGCTTTCGTGGTTTCCGATTTCTCGATCAAACTCGTCTACGACAATTCGCATTCCGCCAAGCCG ATGATCTTCAAGGTGAGCGGCGTATGGGGAAACCATGAAGGATCCATGGTTCTCTGGGTGCTTATCCTGTCGCTCTTCGG CGCCATGGTCGCAGTGTTCGGAAGGAACCTGCCTGATACGCTGCGCTCCCGCGTTCTTGCGGTGCAGGCATCGATTGCGG TCGCCTTTCTTCTCTTCATCGTCTTCACGTCCAATCCGTTCATCCGTCTCGATCCCACGCCATTCGAGGGCAGGGGGCTC AATCCCTTGTTGCAGGATCGCGCGCTGGCTTTTCACCCACCCTGGCTCTATGCGGGCTATGTCGGCTTTTCGATGACGTT TTCCTTTGCCGTCGCCGCGCTGATGGAGGGCCGGGTCGATGCAGCCTGGGCGCGCTGGGTCCGGCCCTGGACCCTCGCCG CATGGCTCTCCCTCACCATCGGCATAGCCATGGGTTCATGGTGGGCCTATTACACGCTCGGCTGGGGCGGTTTCTGGTTC TGGGACCCGGTTGAAAACGCATCTTTGATGCCCTGGATTGCAGGCACCGCGCTTCTCCATTCGGCCATCGTCGCTGAAAA GCGCGGCGCTTTGAAAAGCTGGACTGTGCTCCTCGCCATCATTGCCTTCTCCCTGTCGCTGCTGGGCACCTTTCTTGTCC GGTCCGGCGTGCTTACCTCGGTCCACGCTTTCGCTGTCGATCCGGCACGCGGTGTGGTCATTCTCGGTATCCTCATTTTC TTCGTCGGCGGGTCGCTGGCACTCTACGCATGGCGCGCGCCGCTGCTCCAGGCAGGGGGCATCTTTGCGCCGATCAGCCG CGAAGGCGCGCTGCTGATGAACAATCTGTTGCTTGCCGCAGCCACCGCTTCCGTCTTCATCGGCACGCTCTATCCGCTGC TGCTCGATGCGGTTGCCGGTCAGAAGATCACAGTCGGTCCGCCCTTCTTCAATTTCACCTTTGTACCGATTTTTGTGCCC TTGCTCTGCCTCGTACCCATCGGTCCTTTCCTGAGCTGGAAGCGTGCCGATATTCGAGGCGCGGCGGAACGGCTGCTCGC AGCAGCCGGCCTCGCCTTCATCGCCTGCCTGGCGTCCTTCGCGGTCATGCATGATGGTCCCTGGCTTGCGCCCTTCGGTA TGGCCTTGGCCGTCTGGCTCGTCGCAGGTGCCGTGTCCGAACTCGCATGGCGCACCAAGCTTTTTGCGACGCCTCTGCCG GAGAGCTTTGCCCGCGCCCGCCGCCTGCCGCGCGCCGCATGGGGAATGGCGCTCGCTCACGGCGGCCTCGGCATTGCGGT TGCAGGCATCGTCGGTATCACGGCATGGCGCACCGAACTCATCACCTCGCTCGCCCCTGGCGAAAGCGCGGAACTATCGG GTTACACCTTGACGCTCGAGCGCGTCGGTATGCGCGATGGTCCGAATTTCGTCGCCACGGTCGGCATCGTGCAGGTAGAG CGCGAAGGCCGGCCGGTCGCGACGCTGATGCCTGAGAAACGCCGCTTCCCGACGGAACGTCAGGAGAAGACCGAGGCGGC GATCCACACTAATTTCATCTCCGACCTCTATGTCGTGCTCGGCGAACCGGCGGCCGACGGCAAATGGGTGGTGCGCGCCT ATCGCAATACGTTTGCCCCTCTGATCTGGATAGGCGGCATGATCATGGCGCTCGGTGGCGTCGTCTCGCTGACCGACAGG CGCCTCCGCGTCGGCGCTCCCGTTGCCGCGAAGGCCCGTACGCAACCATTACCGGCGGAGTGA Protein sequence : MIAELGHFALVLALAVSLAQMVVPMIGAQRRDAALMAVAQPAAILQLALVGFAFAVLVYAFVVSDFSIKLVYDNSHSAKP MIFKVSGVWGNHEGSMVLWVLILSLFGAMVAVFGRNLPDTLRSRVLAVQASIAVAFLLFIVFTSNPFIRLDPTPFEGRGL NPLLQDRALAFHPPWLYAGYVGFSMTFSFAVAALMEGRVDAAWARWVRPWTLAAWLSLTIGIAMGSWWAYYTLGWGGFWF WDPVENASLMPWIAGTALLHSAIVAEKRGALKSWTVLLAIIAFSLSLLGTFLVRSGVLTSVHAFAVDPARGVVILGILIF FVGGSLALYAWRAPLLQAGGIFAPISREGALLMNNLLLAAATASVFIGTLYPLLLDAVAGQKITVGPPFFNFTFVPIFVP LLCLVPIGPFLSWKRADIRGAAERLLAAAGLAFIACLASFAVMHDGPWLAPFGMALAVWLVAGAVSELAWRTKLFATPLP ESFARARRLPRAAWGMALAHGGLGIAVAGIVGITAWRTELITSLAPGESAELSGYTLTLERVGMRDGPNFVATVGIVQVE REGRPVATLMPEKRRFPTERQEKTEAAIHTNFISDLYVVLGEPAADGKWVVRAYRNTFAPLIWIGGMIMALGGVVSLTDR RLRVGAPVAAKARTQPLPAE |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| ccmF | AAN62106.1 | putative cytochrome C-type biogenesis protein CcmF | Not tested | PAGI-2(C) | Protein | 1e-106 | 49 |
| ccmF | YP_217241.1 | cytochrome c-type biogenesis protein | Not tested | SPI-12 | Protein | 1e-82 | 46 |
