Gene Information

Name : Xaut_1657 (Xaut_1657)
Accession : YP_001416559.1
Strain : Xanthobacter autotrophicus Py2
Genome accession: NC_009720
Putative virulence/resistance : Unknown
Product : cytochrome c-type biogenesis protein CcmF
Function : -
COG functional category : O : Posttranslational modification, protein turnover, chaperones
COG ID : COG1138
EC number : -
Position : 1875920 - 1877905 bp
Length : 1986 bp
Strand : +
Note : TIGRFAM: cytochrome c-type biogenesis protein CcmF; PFAM: cytochrome c assembly protein; KEGG: rpd:RPD_2003 cytochrome c-type biogenesis protein CcmF

DNA sequence :
ATGATCGCGGAAATCGGCCAGTACGCCCTCGCCCTCGCCTTCGCCCTCTCGCTGGCGCAGGTGCTGCTGCCGTCCTGGGG
CGCGCGGCGCAACGACCCGGTGCTGATGGGCTCGGCCGGCCCCATCGCGCTGGCCCTGTTCGGCTTCATCTCCTTCGCCT
TCGGCGCTCTGGTGCAGCTCTATGTCACCTCGGACTTCACCGTGGTGAACGTGGCCGAGAATTCCCACTCCCAGATGCCG
CTGATCTACAAGATCACCTCGACCTGGGGGAACCACGAGGGCTCCATGCTCCTGTGGGTGTTCGTGCTGTCTTTCTTTGG
CGCGCTGGTGGTGCTGTTCGGCACCAACCTGCCGGATCGGCTGAAGGCGCTGGTGCTGGCGGTGCAGGGGGCGGTGGCGG
CGGCCTTCCTCTCGTTCATCCTGTTCACCTCCAACCCCTTCGCGCGCCTGGTGCCGGCGCCGGCGGAGGGGCGCGACCTC
AACCCCATCCTCCAGGACCCTGGCCTCGCCATCCACCCGCCGCTGCTCTATCTCGGCTATGTGGGGCTCTCCGTCTCCTT
CGCCTTCGCCATCGCGGCGCTGATCGAGGGGCGGATCGACGCGGCCTGGGCGCGCTGGGTGCGGCCGTGGACGCTCGCCG
CCTGGATCTTCCTGACGCTCGGCATCGCCATGGGCTCCTACTGGGCCTATTACGAACTGGGCTGGGGCGGCTGGTGGTTC
TGGGACCCGGTGGAGAACGCCTCCCTCATGCCGTGGCTCGCGGCAACCGCGCTGCTGCATTCCGCCGTGGTGATGGAGAA
GCGCGACGCCCTGAAGGTGTGGACCATCCTCCTCGCCATTCTCGCCTTTTCGCTCTCGCTGGTGGGCACCTTCCTGGTGC
GCTCGGGGGTGCTGACCTCGGTGCACGCCTTCGCCACCGATCCGGCGCGGGGCGTGTTCATCCTCGCCATCCTCACCTTC
TTCATCGCCGGCGGGCTGACCCTGTTCGCGTTCCGCGCCTCCGAGCTGAAGCAGGGCGGGCTGTTCGCGCCCATCTCGCG
GGAGGGGGCGCTGGTCCTCAACAATCTGTTCCTCACCGCCGCCACCGCCGCGGTGCTGGTGGGCACCCTCTACCCGCTGG
CGCTGGAAGCGCTGACCGGGGACAAGATCACGGTGGGGCCGCCCTACTTCAACCTCGCCTTCGGCGGGCTGATGGTGCCG
CTGGTGTTCGCCATGCCGTTCGGCCCGCTGCTGGCCTGGAAGCGCGGCGACCTCATGGGCGTCGCCCAGCGCCTGATGAT
GGCCGCCGCCCTTGCGGTGGTGGCCGCCGTGGTCATCGCCGCCGCCACCACGGGCGGGCCGGTGCTGGCGCCGCTGGTGG
TGGGGCTCGCGGTCTTCATCATGCTGGGGGCGCTCACCGACATCGCCGAGCGCGCGGGCCTCGGGCGGGTGACGGCGCGG
GTGGCGGTGGCGCGTCTCGCCGGGACGCCGCGCTCCGCTTATGGCACTGCCATCGCCCATTTCGGCGTCGGGGTGTGCCT
GCTCGGCATCGTGTGCGAGACCGGCTGGAGCCTGGAGAAGATCGCCTCCGTGAAGCTTGGCGACACCGTCACCATCGGTG
CCCGCAGCCTCACCCTCGACCGGCTGGAAAACCGCACCGGCGCCAACTTCCGCGCCCGCACGGCGGTGTTCTCCATCCGC
GAGGATGGCGAGTCGCAGGGCACCATCGAGGCCTCGCGCCGCATGTTCGCGGCCCGGCAGATGGCCACCACCGAGGCCGG
CATCCGCACCTTCGGCCTCAGCCAGCTCTATGTGAGCATGGGCGAGGAGAGCCCGGACGGGCACATCTCCATGCGCGCCA
CCTACAAGCCGTTCGTGACGCTGATCTGGCTCGGGGCGGTGGTGATGGCGCTGGGCGGCGCGCTCTCGCTGGCCGACCGG
CGCCTGCGCGTCGGCGCCCCCCGCCCCGCCACCAAGCGCCCCCGCGCCCCGGTGCCGGCGGAGTGA

Protein sequence :
MIAEIGQYALALAFALSLAQVLLPSWGARRNDPVLMGSAGPIALALFGFISFAFGALVQLYVTSDFTVVNVAENSHSQMP
LIYKITSTWGNHEGSMLLWVFVLSFFGALVVLFGTNLPDRLKALVLAVQGAVAAAFLSFILFTSNPFARLVPAPAEGRDL
NPILQDPGLAIHPPLLYLGYVGLSVSFAFAIAALIEGRIDAAWARWVRPWTLAAWIFLTLGIAMGSYWAYYELGWGGWWF
WDPVENASLMPWLAATALLHSAVVMEKRDALKVWTILLAILAFSLSLVGTFLVRSGVLTSVHAFATDPARGVFILAILTF
FIAGGLTLFAFRASELKQGGLFAPISREGALVLNNLFLTAATAAVLVGTLYPLALEALTGDKITVGPPYFNLAFGGLMVP
LVFAMPFGPLLAWKRGDLMGVAQRLMMAAALAVVAAVVIAAATTGGPVLAPLVVGLAVFIMLGALTDIAERAGLGRVTAR
VAVARLAGTPRSAYGTAIAHFGVGVCLLGIVCETGWSLEKIASVKLGDTVTIGARSLTLDRLENRTGANFRARTAVFSIR
EDGESQGTIEASRRMFAARQMATTEAGIRTFGLSQLYVSMGEESPDGHISMRATYKPFVTLIWLGAVVMALGGALSLADR
RLRVGAPRPATKRPRAPVPAE

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
ccmF AAN62106.1 putative cytochrome C-type biogenesis protein CcmF Not tested PAGI-2(C) Protein 8e-99 46