Gene Information

Name : cspD (RBAM_020070)
Accession : YP_001421600.1
Strain : Bacillus amyloliquefaciens FZB42
Genome accession: NC_009725
Putative virulence/resistance : Unknown
Product : hypothetical protein
Function : -
COG functional category : K : Transcription
COG ID : COG1278
EC number : -
Position : 2113536 - 2113736 bp
Length : 201 bp
Strand : +
Note : cold shock protein; involved in elicitation plant basal defence

DNA sequence :
ATGCAAAACGGTAAAGTAAAATGGTTCAATAACGAAAAAGGATTCGGCTTCATCGAAGTTGAAGGCGGAGACGACGTATT
TGTTCACTTCACTGCTATCGAAGGAGAAGGATACAAATCATTAGAAGAAGGACAAGAAGTTTCTTTTGAAATTGTCGAAG
GTAATCGTGGACCTCAAGCTTCTAATGTTGTAAAACTCTAA

Protein sequence :
MQNGKVKWFNNEKGFGFIEVEGGDDVFVHFTAIEGEGYKSLEEGQEVSFEIVEGNRGPQASNVVKL

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
unnamed AAO18076.1 unknown Not tested TTSS locus Protein 3e-15 60