Gene Information

Name : VIBHAR_02672 (VIBHAR_02672)
Accession : YP_001445860.1
Strain :
Genome accession: NC_009783
Putative virulence/resistance : Virulence
Product : hypothetical protein
Function : -
COG functional category : T : Signal transduction mechanisms
COG ID : COG4566
EC number : -
Position : 2691850 - 2692446 bp
Length : 597 bp
Strand : -
Note : KEGG: rru:Rru_A1500 8.1e-24 signal transduction histidine kinase (STHK) with CheB and CheR activity K03412:K00575; COG: COG4566 Response regulator; Psort location: cytoplasmic, score: 23

DNA sequence : 
ATGAGTCGTAACCTTTGTTCGCTTTATATTGTTGATGATGAAGAACCAGTATTAGAGTCCATGGCGTTTCTGTTAGAAAG
CTATGGCTATGAGGTTGAGACTTTCTCTAGTGGGATAGATTTTCTAAATGAGGTCAATTTGTTTGCACCTGGCTGTGTTT
TGCTTGATAGCCGCATGCCAGACCTACGCGGGCAAGATGTTCACCAAATGATGAATGAGAAACTCAGCCCAATTAGCGTG
ATTTACCTGACTGGACATGGTGACATTCCAATGGCGGTGGATGCGCTAAAAGATGGCGCACTTGATTTCTTTCAAAAACC
AGTTGATGGTAACGCCCTTGTGATGGCGGTGGATGATGCGATGGTGCAGTCACTCAAAAATGATGAGAAGTTGGGCGCTA
AGCAGGTGCTACAGAGCCTCACTAAGCGTGAGAGAGAAGTTCTCGGTTTGGTCGTCAAAGGGATGAAGAACCAAGAGATG
GCGGACTTATTGTGCGTATCTTTGAGAACGGTTGAGGTGCACCGCTCTAACGTGATGAAGAAGCTCGAAGCAGAGAGCTT
AGCGGTGTTGATCCATAAAGTAGGGCATTTAATCTAG

Protein sequence : 
MSRNLCSLYIVDDEEPVLESMAFLLESYGYEVETFSSGIDFLNEVNLFAPGCVLLDSRMPDLRGQDVHQMMNEKLSPISV
IYLTGHGDIPMAVDALKDGALDFFQKPVDGNALVMAVDDAMVQSLKNDEKLGAKQVLQSLTKREREVLGLVVKGMKNQEM
ADLLCVSLRTVEVHRSNVMKKLEAESLAVLIHKVGHLI

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
ttrR YP_216395.1 tetrathionate reductase complex: response regulator Virulence SPI-2 Protein 7e-36 45
ttrR NP_456141.1 putative two-component response regulator Not tested SPI-2 Protein 7e-36 45
ttrR NP_805058.1 two-component response regulator Virulence SPI-2 Protein 7e-36 45
ttrR CAB37412.1 TtrR Virulence SPI-2 Protein 5e-36 45
ttrR NP_460352.2 response regulator Virulence SPI-2 Protein 2e-36 44

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
VIBHAR_02672 YP_001445860.1 hypothetical protein VFG0488 Protein 7e-37 44