Gene Information

Name : rnhA (VIBHAR_03211)
Accession : YP_001446387.1
Strain :
Genome accession: NC_009783
Putative virulence/resistance : Unknown
Product : ribonuclease H
Function : -
COG functional category : L : Replication, recombination and repair
COG ID : COG0328
EC number : -
Position : 3236663 - 3237127 bp
Length : 465 bp
Strand : +
Note : An endonuclease that specifically degrades the RNA strand of RNA-DNA hybrids

DNA sequence :
ATGACCAAACACGTTGAGATTTTCACTGACGGATCTTGTTTAGGCAATCCGGGCCCGGGTGGTTACGGCATTGTGCTGCG
TTACAAGCAAACGGAAAAGACCCTAGCGAAAGGCTACACGCTGACGACCAATAACCGCATGGAAATGTTGGCTGCAGTGG
TGGCATTGCAAACGCTAAAAGAGCCATGCCAAGTGACGTTAACAACGGATAGCCAGTACGTGCGCCAAGGCATTACGCAA
TGGATTCATAACTGGAAAAAACGTGGCTGGAAAACGGCAGATAAAAAGCCAGTGAAAAATGCCGATTTATGGCAAGCATT
GGATAAAGAAACCGCTCGCCATAAAGTAGATTGGCATTGGGTTAAGGGCCACGCAGGCCATCGTGAGAATGAAATCTGTG
ATGAGCTAGCGCGCACTGCCGCGGAAAACCCAACTGAAGAAGATACGGGGTATCAAGCGTCTTAG

Protein sequence :
MTKHVEIFTDGSCLGNPGPGGYGIVLRYKQTEKTLAKGYTLTTNNRMEMLAAVVALQTLKEPCQVTLTTDSQYVRQGITQ
WIHNWKKRGWKTADKKPVKNADLWQALDKETARHKVDWHWVKGHAGHRENEICDELARTAAENPTEEDTGYQAS

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
rnhA AAO17224.1 RnhA Not tested tcd island Protein 3e-54 73