Gene Information

Name : VIBHAR_01007 (VIBHAR_01007)
Accession : YP_001444233.1
Strain :
Genome accession: NC_009783
Putative virulence/resistance : Virulence
Product : hypothetical protein
Function : -
COG functional category : O : Posttranslational modification, protein turnover, chaperones
COG ID : COG0542
EC number : -
Position : 1017131 - 1019704 bp
Length : 2574 bp
Strand : +
Note : KEGG: eci:UTI89_C2925 0. clpB; heat shock protein K03695; COG: COG0542 ATPases with chaperone activity, ATP-binding subunit; Psort location: cytoplasmic, score: 23

DNA sequence :
ATGCGTCTTGATAGATTCACAAGTAAGTTTCAAATCGCTATCTCTGATGCTCAGTCACTAGCGTTAGGGCGCGATCATCA
ATATATCGAACCTGTGCACCTAATGGTGGCATTGTTTGATCAGAACGGTAGCCCAATTCGTCCACTGCTAACCATGTTAG
ATGTTGACGTGACTCATCTACGCTCTAAATTGAGCGAAATGTTAGACCGACTGCCTAAAGTAAGTGGTATCGGCGGTGAT
GTTCAGCTGTCTAGCTCTATGGGTACAGTTTTCAATTTGTGCGACAAAGTGGCTCAAAAGCGTCAGGACTCCTACATCTC
TTCCGAAGTCTTTTTGCTTGCAGCAATAGAAGACCGTGGCCCACTTGGTCAGCTATTAAAAGAGATGGGCTTGACCGAGC
AGAAAGTCAGTCAAGCGATCGAAAAGATCAGAGGTGGTCAAAAGGTCAATGACCCGAACGCGGAAGAACTACGCCAAGCA
TTGGAAAAGTTCACTATAGATCTAACAGAACGCGCAGAGCAGGGTAAGTTAGATCCTGTTATCGGCCGTGATGATGAAAT
CCGCCGTACCATCCAAGTATTGCAGCGTCGTACCAAGAACAACCCAGTGATCATTGGTGAACCAGGTGTGGGTAAAACTG
CTATCGTTGAGGGCTTGGCTCAGCGTATTATTAATAATGAAGTTCCTGAGGGACTACGTGGTCGCCGCGTACTTTCGTTA
GATATGGGCGCACTTGTTGCAGGTGCAAAATACCGTGGTGAATTTGAAGAGCGTTTGAAATCGGTATTGAATGAGTTAGC
GAAAGAAGAAGGTAACGTCATTCTATTCATTGATGAGCTCCACACTATGGTTGGCGCAGGTAAGGGTGAGGGCTCTATGG
ATGCCGGTAATATGCTAAAACCAGCATTGGCCCGCGGGGAACTCCACTGTGTGGGCGCGACTACATTGGATGAATACCGC
CAATATATAGAGAAAGATGCCGCACTTGAGCGTCGTTTCCAAAAAGTGCTGGTGGATGAGCCAACAGTAGAAGATACGAT
TGCCATTCTGCGTGGTTTGAAAGAGCGCTATGAGCTTCACCATCACGTAGAAATTACCGACCCAGCGATCGTAGCAGCTG
CGAGCTTGTCGCATCGTTATGTTTCGGATCGTCAATTGCCTGATAAAGCAATCGACCTTATTGATGAAGCAGCCTCTAGC
ATTCGTCTACAGATCGACTCCAAGCCAGAGTCTTTAGACAAACTCGAACGTAAAATCATCCAACTTAAGATCGAGCAGCA
AGCGCTGAGCAACGAGCATGATGAAGCAAGTGAAAAGCGCTTGGATGTGCTTAATGAGGAATTGAATGAAAAAGAGCGCG
AATATGCAGAGCTAGAAGAAGTTTGGAATGCTGAAAAAGCCGCACTCTCTGGTACGCAACATATTAAAGGTGAACTAGAG
CAAGCTCGTATGGATATGGACTTTGCACGCCGTGCTGGTGACCTAAACCGCATGTCCGAATTGCAATACGGTCGTATTCC
TGAACTTGAAAAGCAACTTGATCTTGCTACTCAAGCTGAAATGCAAGAGATGACGCTATTGCGGAATAAGGTGACGGACA
ACGAGATTGCAGAAGTGCTTTCTAAGCAAACGGGTATTCCGGTCTCTAAAATGCTCGAAGCAGAAAAAGAAAAACTGCTC
CGCATGGAAGAGGTATTGCACAAACGTGTGATTGGTCAGGCAGAAGCGGTTGAAGTGGTGTCTAACGCAATTCGTCGCAG
TCGAGCTGGCTTATCCGATCCAAACAAACCGATTGGTTCCTTCTTATTCTTAGGTCCAACAGGTGTGGGTAAAACAGAGC
TATGTAAGACACTCGCGAGCTTCATGTTTGATAGTGAAGATGCCATGGTACGTATCGATATGTCCGAGTTCATGGAGAAA
CACTCTGTAGCGAGATTGGTTGGTGCGCCTCCGGGTTATGTTGGCTATGAAGAAGGTGGCTATTTAACAGAAGCAGTTCG
CCGTAAACCTTATTCTGTCATCCTATTAGATGAAGTAGAGAAGGCACACCCAGATGTGTTCAATATTCTGCTGCAAGTAT
TGGATGATGGTCGGCTAACTGATGGTCAGGGTAGAACGGTGGATTTCCGTAACACTGTAGTGATCATGACTTCGAACTTG
GGTTCTGCTCGTATCCAGGAGAACTTTGCGACGTTGGATTACCAAGGTATTAAGAATGAAGTGATGGATGTGGTTAGCAA
GCACTTCCGCCCAGAGTTCTTAAACCGTGTTGATGAAAGTGTGGTATTCCACCCGCTTGGTCAAGAGCATATTAAGTCGA
TTGCATCTATTCAACTTGAGCGTCTAGCGAAACGCTTAGAAGAAAAAGGTTATCAATTAGAGATATCCGAGAAAGCCCTC
GATTTGATTGCTCAAGTTGGTTTCGATCCTGTCTATGGTGCGCGACCTTTAAAACGTGCAATTCAACAGAATGTTGAGAA
CCCATTAGCGAAATCAATCTTGGCTGGCCAAATCTTGCCAGACAAGAAAGTACAGTTGATTGTGAACAACGACCAAATCA
TTGCTCACCAGTAA

Protein sequence :
MRLDRFTSKFQIAISDAQSLALGRDHQYIEPVHLMVALFDQNGSPIRPLLTMLDVDVTHLRSKLSEMLDRLPKVSGIGGD
VQLSSSMGTVFNLCDKVAQKRQDSYISSEVFLLAAIEDRGPLGQLLKEMGLTEQKVSQAIEKIRGGQKVNDPNAEELRQA
LEKFTIDLTERAEQGKLDPVIGRDDEIRRTIQVLQRRTKNNPVIIGEPGVGKTAIVEGLAQRIINNEVPEGLRGRRVLSL
DMGALVAGAKYRGEFEERLKSVLNELAKEEGNVILFIDELHTMVGAGKGEGSMDAGNMLKPALARGELHCVGATTLDEYR
QYIEKDAALERRFQKVLVDEPTVEDTIAILRGLKERYELHHHVEITDPAIVAAASLSHRYVSDRQLPDKAIDLIDEAASS
IRLQIDSKPESLDKLERKIIQLKIEQQALSNEHDEASEKRLDVLNEELNEKEREYAELEEVWNAEKAALSGTQHIKGELE
QARMDMDFARRAGDLNRMSELQYGRIPELEKQLDLATQAEMQEMTLLRNKVTDNEIAEVLSKQTGIPVSKMLEAEKEKLL
RMEEVLHKRVIGQAEAVEVVSNAIRRSRAGLSDPNKPIGSFLFLGPTGVGKTELCKTLASFMFDSEDAMVRIDMSEFMEK
HSVARLVGAPPGYVGYEEGGYLTEAVRRKPYSVILLDEVEKAHPDVFNILLQVLDDGRLTDGQGRTVDFRNTVVIMTSNL
GSARIQENFATLDYQGIKNEVMDVVSKHFRPEFLNRVDESVVFHPLGQEHIKSIASIQLERLAKRLEEKGYQLEISEKAL
DLIAQVGFDPVYGARPLKRAIQQNVENPLAKSILAGQILPDKKVQLIVNNDQIIAHQ

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
clpC YP_005163377.1 ATP-dependent Clp protease ATP-binding subunit Not tested Not named Protein 2e-164 45
STY0294 NP_454876.1 ClpB-like protein Not tested SPI-6 Protein 6e-101 42

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
VIBHAR_01007 YP_001444233.1 hypothetical protein VFG2084 Protein 1e-107 41