|
Name : VIBHAR_06455 (VIBHAR_06455) Accession : YP_001448573.1 Strain : Genome accession: NC_009784 Putative virulence/resistance : Virulence Product : RTX toxin transporter Function : - COG functional category : V : Defense mechanisms COG ID : COG2274 EC number : - Position : 1612360 - 1614504 bp Length : 2145 bp Strand : - Note : KEGG: aha:AHA_1356 1.2e-185 rtxB; RTX toxin transporter; COG: COG2274 ABC-type bacteriocin/lantibiotic exporters, contain an N-terminal double-glycine peptidase domain; Psort location: endoplasmic reticulum, score: 9 DNA sequence : ATGGTTAGGGCTTACCCAAAACGGGATGCGCTGTCGCACAGTGCTGTCGTAAGCTCTCAGGTTTTGCTCAAGCTTTTGGG CGTCTCTTGTCAAATGCCAACAGAGCATCCAGGAGGCGATCTAAAAGGCTGGCTCAAGAAAGCGTCAGGTCAAACTGATG GTCAACTGAGATTAAAACGACTCTCAGAAAACACACTCACGGCTTCACATTTGCCTCTTGCGTATCAACAGCACGATGGC GAATTTGTGGTGCTCGCTCGATTGTCTGATGACCAAGCGTTGATCCAACGTCATCACGAGCAAACCCCCCAAGTCATCTC AAGAACCACGCTTGAAGAAGCCTGGGCAGGCCAAGTGATCCAATATCACGAAAGCGGGCGTCAGTTTGATATTCGCTGGT TTATCCCGGAGTTTATTCGACATCGTGGCTTACTGGGCGAAATCCTGTTCTTTTCCCTCCTCCTTCAGATGCTCGCACTG GTGCTCCCACTATTTTTCCAAGTGATCATGGACAAAGTGCTGGTGCACAATGCGCTGTCGACACTTGACGTGTTAGTTGT GGCATTGGTGGTGGTCGGTCTCTTCGAAGTGATATTGAAAGGACTGCGGGAATATTTGTTGGCGCACACCACGACGCGTA TCGACATTCGGCTTGGCACAAAACTCTTTAAACACTTACTTGGGCTGCCCCTGCTTTACTTCAAAAATCGCCATGTGGGC GCGATCGTCACTCGAGTTCGTGAGCTCGACAGTATTCGAAACCTGCTCACCGGCGCGGCGTTAACTTTGTTGGTGGATGT CAGTTTTACCTTTGTTTTCCTGGGTGTGATGGTCTATTTGTCTGCACCTCTGACGGCACTCGTCATCGCGACCTTGCCAC TGTATGCCTTGCTTGCATGGGCGACGTCCGAGCCACTCAAGCGCCGTATCGAGCACCAGTTCGCTTGTGGGGCCAAAAAC ACCGCCTTTTTGACGGAATCGCTCAATGGCGTGGAGACAGTGAAAAGTCTGGCCCTAGAACCCCGGTTTGAACGCCGCTG GGAAGGACAGACTCAAGAACTGGTTGCGGCCAACTTTTCGCGTCAAAGTTTCCAAGCGCAAGTCAGTCAATGCGTCACAC TATTGCAAAAAGTCACCTCGGTTGGTGTCCTCTGGCTGGGCGCCCAGATGGTGATGTCTTTGGAATTGACGATTGGTCAG TTGATTGCGTTTAATATGATGGTCAACCATGTGAGTCAGCCCCTCGCCAAACTCGTAGAACTTTGGCAGCAGTTTATCCA AACACGCGTTGCCGTCGACAACCTGAGTGAAATGCTCAATCTGCCTGCGGAACAAGAGATGGGCGAGTTCCAACCTAACG CACCAATCCAAGGGCACATCGAGTTTCAACAAGTGTGGTTTCGCTACCAGCCGCAACTGGCACCAGTGTTACATGGCCTC TCTTTAACGATCAAACCGGGCGAGTCTATCGGATTGGTGGGGCCTTCTGGCTCTGGAAAAAGTACCGTGACGCGCCTTAT TCAAAAACTCTACCTGGCCGAAAAAGGCCAAGTCCTGATCGATGGTACGCCACTCAATCAATGGTCTGCTGCGGCCCTCA GGCAGGGCATTGGCGTGGTGTTGCAAGAAAACTATTTGTTCCACCGAACGGTCCGGGAAAACATCGCCATCCGACAACCG ACCGCGTCGTTTGAGGCGGTGGTTGAGGCTGCCAAACTCGCAGGCGCTCACGAGTTCATCATTAAAATGCCCAAAGGCTA TGACACCCTGCTGGCAGAAGGGGGGGCGTCGTTATCCGGGGGCCAGAAACAACGAATCGCGATCGCTCGCGCGTTAATGA CCCAGCCGCGCATCCTTATTTTTGACGAGGCCACTAGCGCTTTGGACGAAGAGTCCCAACGCATCGTCAACCAGAACATG GCGAAGATCGCCCGGGGACGAACGGTGATCACCGTCGCCCATCGCCTATCGGCGGTTCAGGGTTGCGATCGCATCGCGGT CATTGAACAAGGGGAAGTGACGGAGTTGGGTAACCATCAACACTTGTTAGCCCAACAAGGCTGCTACGCCCGGTTATGGC ATATCCAGCAAAACAAACAAGTGGAATCTGTAGGTGAAGAGGTGTTGCCATGTTCCCAATCATAG Protein sequence : MVRAYPKRDALSHSAVVSSQVLLKLLGVSCQMPTEHPGGDLKGWLKKASGQTDGQLRLKRLSENTLTASHLPLAYQQHDG EFVVLARLSDDQALIQRHHEQTPQVISRTTLEEAWAGQVIQYHESGRQFDIRWFIPEFIRHRGLLGEILFFSLLLQMLAL VLPLFFQVIMDKVLVHNALSTLDVLVVALVVVGLFEVILKGLREYLLAHTTTRIDIRLGTKLFKHLLGLPLLYFKNRHVG AIVTRVRELDSIRNLLTGAALTLLVDVSFTFVFLGVMVYLSAPLTALVIATLPLYALLAWATSEPLKRRIEHQFACGAKN TAFLTESLNGVETVKSLALEPRFERRWEGQTQELVAANFSRQSFQAQVSQCVTLLQKVTSVGVLWLGAQMVMSLELTIGQ LIAFNMMVNHVSQPLAKLVELWQQFIQTRVAVDNLSEMLNLPAEQEMGEFQPNAPIQGHIEFQQVWFRYQPQLAPVLHGL SLTIKPGESIGLVGPSGSGKSTVTRLIQKLYLAEKGQVLIDGTPLNQWSAAALRQGIGVVLQENYLFHRTVRENIAIRQP TASFEAVVEAAKLAGAHEFIIKMPKGYDTLLAEGGASLSGGQKQRIAIARALMTQPRILIFDEATSALDEESQRIVNQNM AKIARGRTVITVAHRLSAVQGCDRIAVIEQGEVTELGNHQHLLAQQGCYARLWHIQQNKQVESVGEEVLPCSQS |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| hlyB | NP_755448.1 | hemolysin B | Virulence | PAI I CFT073 | Protein | 1e-114 | 45 |
| hlyB | CAD33760.1 | hemolysin B | Virulence | PAI I 536 | Protein | 2e-114 | 45 |
| hlyB | CAD42038.1 | HlyB protein | Virulence | PAI II 536 | Protein | 2e-114 | 45 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| VIBHAR_06455 | YP_001448573.1 | RTX toxin transporter | VFG1269 | Protein | 5e-121 | 49 |
| VIBHAR_06455 | YP_001448573.1 | RTX toxin transporter | VFG0841 | Protein | 2e-106 | 46 |
| VIBHAR_06455 | YP_001448573.1 | RTX toxin transporter | VFG1557 | Protein | 1e-114 | 45 |
| VIBHAR_06455 | YP_001448573.1 | RTX toxin transporter | VFG1501 | Protein | 1e-114 | 45 |
| VIBHAR_06455 | YP_001448573.1 | RTX toxin transporter | VFG0907 | Protein | 6e-115 | 45 |
