Gene Information

Name : VIBHAR_05120 (VIBHAR_05120)
Accession : YP_001447253.1
Strain :
Genome accession: NC_009784
Putative virulence/resistance : Virulence
Product : hypothetical protein
Function : -
COG functional category : S : Function unknown
COG ID : COG3272
EC number : -
Position : 357474 - 358424 bp
Length : 951 bp
Strand : +
Note : COG: COG3272 Uncharacterized conserved protein; Psort location: cytoplasmic, score: 23

DNA sequence :
ATGGAATCTTCAATCAAAGTCGGTATCAGCTCTTGTGTACTTGGAGAACGAGTACGTTTCGATTCGGGACATAAAATCAG
CAACTTCGTAACGAAGGAATTAGACGGCTACTTCAGCTTTGTGCCAGTTTGCCCTGAAGTTGGTGTAGGCATGTCTGTGC
CGCGTCCGACTATCCGCCTAGTCAGCAATGAAGAACGTATTGCATTGGTCGAGACAAAAAATCCTGACAACGACCACACA
GAAAACATGCTCGCTTATTCCGAAAATAAAGTGAACGAACTACAAGGTGAGCAACTGTGCGGTTACATCGTTTGCGCTAA
GTCGCCGACTTGCGGTATGGAACGTGTAAAGGTGTACAGCAAAAACAATGCGGCAAAAGAAGGTGTTGGTTTGTACACCA
AAACGTTAATGGAAAAAATGCCGTGGTTACCAGTAGAAGAAGACGGTCGCCTGAACGATCCGGTATTAAAAGAGAACTTC
ATTACGCGTATTTATTGTTTGAATGACTTTTATGAGTCAATGGGTGGAGAGCCAACCCGCGGTAAGATTGTCGAGTTTCA
CTCGCGCTACAAGCTGACGCTGATGGCGCACCACCCAGAATCGTACCGTTCTCTTGGTCGATTGGTGGCTGATGTAGCGA
ACTATGAAATCGATGAGTTTTACAGCCAATACCGTCTGGGCTTGATGCAAGCACTACAAAACCGTGCCAGCCGCAAAAAT
AACACCAATGTGTTGATGCACTTACAAGGCTACTTTAAACGCTCATTAACTTCTGACGAGAAAGCAGAACTTGCGACCGT
GATCAGTGACTACCGCACAGGGTTATTACCACTGCTTGCGCCGCTAACGTTAATTAAGCACTATCTCAACGCGTACCCAG
ATGCGTACTTACAAAAACAGAAATATCTAGAACCATACCCACAGGAGATGAGACTTCGTTATGGATTGTAG

Protein sequence :
MESSIKVGISSCVLGERVRFDSGHKISNFVTKELDGYFSFVPVCPEVGVGMSVPRPTIRLVSNEERIALVETKNPDNDHT
ENMLAYSENKVNELQGEQLCGYIVCAKSPTCGMERVKVYSKNNAAKEGVGLYTKTLMEKMPWLPVEEDGRLNDPVLKENF
ITRIYCLNDFYESMGGEPTRGKIVEFHSRYKLTLMAHHPESYRSLGRLVADVANYEIDEFYSQYRLGLMQALQNRASRKN
NTNVLMHLQGYFKRSLTSDEKAELATVISDYRTGLLPLLAPLTLIKHYLNAYPDAYLQKQKYLEPYPQEMRLRYGL

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
orf319 NP_460354.1 inner membrane protein Not tested SPI-2 Protein 4e-75 49
ORF 319 CAB37410.1 - Not tested SPI-2 Protein 3e-75 49
SC1410 YP_216397.1 inner membrane protein Not tested SPI-2 Protein 6e-75 49
STY1731 NP_456139.1 putative pathogenicity island protein Not tested SPI-2 Protein 4e-75 49
t1257 NP_805060.1 pathogenicity island protein Not tested SPI-2 Protein 4e-75 49

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
VIBHAR_05120 YP_001447253.1 hypothetical protein VFG0490 Protein 2e-75 49