|
Name : CKO_03831 (CKO_03831) Accession : YP_001455343.1 Strain : Citrobacter koseri ATCC BAA-895 Genome accession: NC_009792 Putative virulence/resistance : Virulence Product : RNA polymerase sigma factor FecI Function : - COG functional category : K : Transcription COG ID : COG1595 EC number : - Position : 3558037 - 3558555 bp Length : 519 bp Strand : + Note : Member of the extracytoplasmic function sigma factors which are active under specific conditions; binds with the catalytic core of RNA polymerase to produce the holoenzyme and directs bacterial core RNA polymerase to specific promoter elements to initiate DNA sequence : ATGCCGACTCCAGTTCAGTGCGCTCCTTTAACGTTTGAATCGCTGTATCGCGCGCATCACGGCTGGCTGACGCACTGGCT GGCGCGAAAGTTACAGTCGGCGTTCGACGCCGACGACGTCGCCCAGGACACCTTCCTGCGTATTATTAACGGTGAATCTC TGACGGCGATTCGCGACCCAAAGTCGTTTCTCTGCACCGTCGCCAAACGGGTGATGATCGACCTTTTCCGCCGCAATGCG CTGGAAAAAGCGTATCTGGAGATGCTTGCGCAGTTACCCGAAACGCTGGCACCTTCCGCTGAAGAAAAGCAGTCGCATCT CGAAACGCTGCAACTTGTCGACAGGATGCTGGACGGGTTGAGCGCCAAAGCGAGAACGGCCTTCCTGCTTTCTCAGCTTG ACGGGCTGACCTACAGCGACATCGCGCAACGTCTGAATGTTTCCGTCAGTTCGGTGAAAAAGTACGTCGCGAAAGCCACG GAACACTGCCTGCTGTTCCGCCTGGAGCATGATCTGTGA Protein sequence : MPTPVQCAPLTFESLYRAHHGWLTHWLARKLQSAFDADDVAQDTFLRIINGESLTAIRDPKSFLCTVAKRVMIDLFRRNA LEKAYLEMLAQLPETLAPSAEEKQSHLETLQLVDRMLDGLSAKARTAFLLSQLDGLTYSDIAQRLNVSVSSVKKYVAKAT EHCLLFRLEHDL |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| unnamed | AAL08458.1 | FecI | Virulence | SRL | Protein | 1e-54 | 77 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| CKO_03831 | YP_001455343.1 | RNA polymerase sigma factor FecI | VFG1049 | Protein | 4e-55 | 77 |
