Gene Information

Name : CKO_04651 (CKO_04651)
Accession : YP_001456137.1
Strain : Citrobacter koseri ATCC BAA-895
Genome accession: NC_009792
Putative virulence/resistance : Unknown
Product : putative DNA-binding transcriptional regulator
Function : -
COG functional category : K : Transcription
COG ID : COG0583
EC number : -
Position : 4285978 - 4286907 bp
Length : 930 bp
Strand : +
Note : KEGG: shn:Shewana3_3435 8.8e-10 transcriptional regulator, LysR family K06022; COG: COG0583 Transcriptional regulator; Psort location: cytoplasmic, score: 23

DNA sequence :
ATGGAAAGATTAAAACGCATGTCGGTGTTCGCCAAAGTCGTTGAATTTGGCTCCTTTACCGCCGCTGCCAGACAGCTACA
AATGAGCGTTTCCTCTATCAGCCAGACCGTGGCAAAACTGGAAGATGAGCTACAGGTTAAGCTGCTAAACCGCAGTACGC
GCAGCATTGGGCTGACCGAGGCCGGTAAAATTTATTATCAGGGTTGCCGTCGGATGCTGCACGAAGTGCAGGATGTCCAT
GAGCAGCTTTATGCCTTCAACAACACGCCTATCGGCACCCTGCGAATTGGTTGTTCTTCAACCATGGCACAAAATGTCCT
CGCCGGGTTAACGGCCAAAATGCTGAAAGAGTACCCTGGCCTGACGGTTAACCTGGTGACCGGCATCCCGGCGCCGGATC
TGATCGCTGATGGTCTGGACGTGGTGATCCGCGTCGGTGCGTTGCAGGACTCCAGCCTGTTTTCACGCCGTCTGGGGGCA
ATGCCGATGGTGGTGTGCGCCGCCAAAAGTTATCTCGCGCAATTTGGCGTGCCGGAAAAACCCGCCGACCTCAGCAATCA
CTCATGGCTGGAATACAGCGTGCGCCCGGATAACGAGTTTGAGTTGATTGCGCCGGAAGGGATCTCCACCCGGCTGATCC
CACAAGGACGCTTCGTCACCAACGATCCGATGACGCTCAGCCGCTGGCTGACCGCAGGCGCCGGGATCGCCTACGTTCCG
TTGATGTGGGTGATCAATGAGATCAACAGCGGAGATCTGGAGATCCTGCTGCCTCGCTACCAGTCCGATCCACGCCCGGT
TTACGCGCTGTATACCGAAAAAGATAAGTTGCCGCTGAAGGTGCAGGTGGTGATTAACTATCTGACAGACTATTTTGTCG
ATGTCGCGAAGCTATTTCAGGGAATGTACGGTCGGGGAAAAGAGAAGTGA

Protein sequence :
MERLKRMSVFAKVVEFGSFTAAARQLQMSVSSISQTVAKLEDELQVKLLNRSTRSIGLTEAGKIYYQGCRRMLHEVQDVH
EQLYAFNNTPIGTLRIGCSSTMAQNVLAGLTAKMLKEYPGLTVNLVTGIPAPDLIADGLDVVIRVGALQDSSLFSRRLGA
MPMVVCAAKSYLAQFGVPEKPADLSNHSWLEYSVRPDNEFELIAPEGISTRLIPQGRFVTNDPMTLSRWLTAGAGIAYVP
LMWVINEINSGDLEILLPRYQSDPRPVYALYTEKDKLPLKVQVVINYLTDYFVDVAKLFQGMYGRGKEK

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
tcaR1 CAI77370.1 putative lysR-family transcriptional regulator Not tested tc-PAIYe Protein 1e-121 83