Gene Information

Name : EcHS_A1099 (EcHS_A1099)
Accession : YP_001457826.1
Strain : Escherichia coli HS
Genome accession: NC_009800
Putative virulence/resistance : Unknown
Product : cold shock protein CspG
Function : -
COG functional category : K : Transcription
COG ID : COG1278
EC number : -
Position : 1112298 - 1112510 bp
Length : 213 bp
Strand : +
Note : identified by match to protein family HMM PF00313

DNA sequence :
ATGTCTAATAAAATGACTGGTTTAGTAAAATGGTTTAACGCAGATAAAGGTTTTGGCTTTATCACTCCTGATGATGGCAG
CAAAGACGTTTTCGTCCATTTCACTGCCATCCAGAGTAATGAATTCCGCACGCTGAACGAAAATCAGAAAGTTGAATTTT
CTATTGAGCAGGGGCAACGTGGCCCCGCGGCAGCGAACGTTGTTACGCTCTAA

Protein sequence :
MSNKMTGLVKWFNADKGFGFITPDDGSKDVFVHFTAIQSNEFRTLNENQKVEFSIEQGQRGPAAANVVTL

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
unnamed AAO18076.1 unknown Not tested TTSS locus Protein 7e-21 72
cspH YP_216241.1 cold shock protein-like protein Not tested SPI-11 Protein 6e-10 50