Gene Information

Name : EcHS_A1642 (EcHS_A1642)
Accession : YP_001458346.1
Strain : Escherichia coli HS
Genome accession: NC_009800
Putative virulence/resistance : Unknown
Product : cold shock DNA-binding protein
Function : -
COG functional category : K : Transcription
COG ID : COG1278
EC number : -
Position : 1667514 - 1667729 bp
Length : 216 bp
Strand : -
Note : identified by match to protein family HMM PF00313

DNA sequence :
ATGATGTCTAACAAAATGACTGGTTTAGTGAAATGGTTTAACCCTGAAAAAGGTTTTGGTTTCATCACGCCGAAAGATGG
TAGCAAAGATGTGTTTGTCCATTTCTCAGCTATTCAGAGCAACGATTTCAAAACGTTAACTGAGAATCAGGAAGTCGAAT
TTGGTATTGAGAACGGACCTAAAGGCCCCGCGGCTGTTCATGTTGTGGCACTTTGA

Protein sequence :
MMSNKMTGLVKWFNPEKGFGFITPKDGSKDVFVHFSAIQSNDFKTLTENQEVEFGIENGPKGPAAVHVVAL

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
unnamed AAO18076.1 unknown Not tested TTSS locus Protein 3e-22 78
cspH YP_216241.1 cold shock protein-like protein Not tested SPI-11 Protein 2e-08 47