Gene Information

Name : EcHS_A0342 (EcHS_A0342)
Accession : YP_001457113.1
Strain : Escherichia coli HS
Genome accession: NC_009800
Putative virulence/resistance : Virulence
Product : hypothetical protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 354549 - 354974 bp
Length : 426 bp
Strand : -
Note : identified by glimmer

DNA sequence : 
ATGAACGGTATAAAAACGGGGCTGGGGATCACGCCGGGTGAGCACATTATCAGTGCCGACTCTGCGCTCAGCAGAAATAT
CCGGCAGTGTTTCTGCCTTTCCTGCCATGGCCGGTTGATTCTGCAGACAGATGCTCAGGGGGCGTGGTTTGAGCATGATT
TACATGCCCTGAGTGAGCAACAGAAGGCGGACTGTGTGGTGCTGAATCCGGAGAAGTCCCACCCTTACATTGAGGATATG
GCGATGTTTTTATCGCCATTACCGGTCGTGCTGGAGTGGCATTGTGTGATGTGCGGGCAGCATTTTCCCGGGAAAAAGTT
CTGTGAAGCCTGTGGCACGGGGATCTATTCCAGAGCGGTATGTACAAAGTATGTTTACAGCTACCAGCCAGACTTGTTCC
AGGACTGTGGAAGTGCGAGCACTTAA

Protein sequence : 
MNGIKTGLGITPGEHIISADSALSRNIRQCFCLSCHGRLILQTDAQGAWFEHDLHALSEQQKADCVVLNPEKSHPYIEDM
AMFLSPLPVVLEWHCVMCGQHFPGKKFCEACGTGIYSRAVCTKYVYSYQPDLFQDCGSAST

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
ECO103_3571 YP_003223432.1 hypothetical protein Not tested LEE Protein 1e-59 96
S3185 NP_838468.1 hypothetical protein Not tested SHI-1 Protein 1e-59 96
SF2980 NP_708754.1 hypothetical protein Not tested SHI-1 Protein 1e-59 96
aec59 AAW51742.1 Aec59 Not tested AGI-3 Protein 6e-61 95
unnamed CAE85180.1 hypothetical protein Not tested PAI V 536 Protein 9e-59 93

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
EcHS_A0342 YP_001457113.1 hypothetical protein VFG0644 Protein 3e-60 96