Gene Information

Name : Ssed_1082 (Ssed_1082)
Accession : YP_001472821.1
Strain : Shewanella sediminis HAW-EB3
Genome accession: NC_009831
Putative virulence/resistance : Unknown
Product : ErfK/YbiS/YcfS/YnhG family protein
Function : -
COG functional category : S : Function unknown
COG ID : COG1376
EC number : -
Position : 1282834 - 1283835 bp
Length : 1002 bp
Strand : +
Note : KEGG: slo:Shew_1006 ErfK/YbiS/YcfS/YnhG family protein

DNA sequence :
ATGATGCGAGTAATGATGTGGTTCATCTTAAGCTTAATTCCTGCCGTGACCCTGGCTAATGTGTATCCACTGCCAGAGAA
GGGAAGCCGTCTTATCGGTGAAGTCCAGGAACATGTGGTAGCGCAGGGCGACTATTTTCAAACCATAGCGAAAGAATACA
ATATAGGTATTCTTGAGTTGATGGAGACGAACCCGGGTGTCGATCCGTTTCTTCCTACTGTGGGCTCAAAGCTTGTCATC
CCAACTCAGATGTTGCTTCCCGATGTTCCCAGAAAAGGGATAGTGATTAACCTGCCAGAACTTCGCCTCTATTATTTTCC
GACAAATGGTAAAGAGGTGCATGTTTTCCCTGTGGGGATTGGGCGTGTCGGTCGTGAAACCCCGGAGATGGTGACTAAGA
TTAAGTCGAGGATCCCTAACCCTAGCTGGACGCCACCGGCAAGTATACGTCGTGACCATCTCGCAGAGCGTGGCGAGGTG
CTACCGCGCGTCGTGCCTGCCGGACCCGACAATCCATTAGGTAAATATGCTATGCAGCTTTCTCATGGAGACGGCAGTTA
CCTCATTCATGGTACCAATAAAGATTTTGGTGTCGGCATGCGTGTGAGCTCCGGTTGTGTCCGTTTGAACCCTGACGATA
TCGAATGGTTGTTCCATCAGGCTAAATACGGTGATTCGGTGAGAGTGATCAATGAAACCGTTAAGATCTCCTCTGAGCCT
GATGGCAGTCAGATCATCGAGGTGCATTCCGCTCTGTCTAAATCTGAGTCAGATGTCGAGCGGGAGAAGGTCGTTTCAAT
GAAGGCCGGAGTAGTAAAATTTATCAGCCAGGAAGGGATTGATAGCTTTAAGGCTAATGATGCGCTATTGACTCAAAACG
GGTTGCCGGTGAATATCCGCACAATGGATGATTCAGACAGTATCACACTATCCTCGGGCATTGAGTCTGCGGCAAGTTCT
GAATCTGTAACAAATGAGAGTGAGCCCTCAGCCAGCTTATAG

Protein sequence :
MMRVMMWFILSLIPAVTLANVYPLPEKGSRLIGEVQEHVVAQGDYFQTIAKEYNIGILELMETNPGVDPFLPTVGSKLVI
PTQMLLPDVPRKGIVINLPELRLYYFPTNGKEVHVFPVGIGRVGRETPEMVTKIKSRIPNPSWTPPASIRRDHLAERGEV
LPRVVPAGPDNPLGKYAMQLSHGDGSYLIHGTNKDFGVGMRVSSGCVRLNPDDIEWLFHQAKYGDSVRVINETVKISSEP
DGSQIIEVHSALSKSESDVEREKVVSMKAGVVKFISQEGIDSFKANDALLTQNGLPVNIRTMDDSDSITLSSGIESAASS
ESVTNESEPSASL

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
erfK YP_853091.1 hypothetical protein Not tested PAI IV APEC-O1 Protein 2e-60 44