Gene Information

Name : Ssed_1989 (Ssed_1989)
Accession : YP_001473726.1
Strain : Shewanella sediminis HAW-EB3
Genome accession: NC_009831
Putative virulence/resistance : Unknown
Product : hydroxyacylglutathione hydrolase
Function : -
COG functional category : R : General function prediction only
COG ID : COG0491
EC number : -
Position : 2406343 - 2407161 bp
Length : 819 bp
Strand : -
Note : KEGG: slo:Shew_2114 hydroxyacylglutathione hydrolase

DNA sequence :
ATGCAAGACGCGCAATCGCTAGTACCACAATCCAGCTCTGATAGCATAACCGTTACGCCAATATCCGCGTTTGATGATAA
TTATATCTGGGTCATCTCCCAAGCATCACACTCTTTTGTTTATGTCGTCGATCCGGGTGATGCTGAGGTGGTAATAAGTC
ATCTGGAAGAGCACAAACAGGTCTTGGCAGGTGTATTAATCACTCACCATCATGAGGACCATACCGGAGGTCTTGAAAGA
CTCATCGAGTACACAGATCATGAATTTGATATTTTTGGCCCGAAAAATGAAAATATCGCCCATGTAACGACGCCTATATC
AACCCAAACAGAGGTCACACTGTCAAAACTAACCTCGAAGGCAAAGATTATCTCTGTCCCGGGGCACACCTTAGGCCATA
TAGCCTATCTGATAGAAAGCCACCTATTTTGCGGTGACACGCTCTTCAGCGGAGGCTGCGGTCGAATATTTGAAGGAACG
GCTGAGCAGATGCACCACTCACTGCAAGCATTTGCCAAACTGCCCCTCAATACTCAGGTCTATTGCGCTCATGAATACAC
ACTTTCAAACCTTAAGTTTGCCCTCGCAGTCGACACGGAAAATGAGGCCTTGGCGGCTCATAATACAGACTGTATCGCAC
AACGAGAGCTAGGAAAGCCAACCCTCCCATCAAGTATTGGGCAGGAGCTTAGTATCAACCCTTTCCTACGCTGTCATACT
CAGGCGATCCAGCGCTCAGTTTCCAACCATTTCGAGGTTAATCACTCAGATAATGTCACCGTTTTCGGGCTTCTCAGACA
ATGGAAGGACAATTTCTAA

Protein sequence :
MQDAQSLVPQSSSDSITVTPISAFDDNYIWVISQASHSFVYVVDPGDAEVVISHLEEHKQVLAGVLITHHHEDHTGGLER
LIEYTDHEFDIFGPKNENIAHVTTPISTQTEVTLSKLTSKAKIISVPGHTLGHIAYLIESHLFCGDTLFSGGCGRIFEGT
AEQMHHSLQAFAKLPLNTQVYCAHEYTLSNLKFALAVDTENEALAAHNTDCIAQRELGKPTLPSSIGQELSINPFLRCHT
QAIQRSVSNHFEVNHSDNVTVFGLLRQWKDNF

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
gloB AAO17226.1 GloB Not tested tcd island Protein 1e-38 41