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Name : rnhA (Ssed_1992) Accession : YP_001473729.1 Strain : Shewanella sediminis HAW-EB3 Genome accession: NC_009831 Putative virulence/resistance : Unknown Product : ribonuclease H Function : - COG functional category : L : Replication, recombination and repair COG ID : COG0328 EC number : - Position : 2409189 - 2409659 bp Length : 471 bp Strand : - Note : An endonuclease that specifically degrades the RNA strand of RNA-DNA hybrids DNA sequence : ATGATGGGTATGAAACAGCTCTCTATATTTACTGATGGCTCCTGCTTAGGTAATCCCGGGCCTGGTGGCTATGGTGTGGT GATGAAATACAAGCAGCACACCAAAGAGATCGCTGACGGTTTCCTGTTAACAACCAACAATCGCATGGAATTATTGGCGC CTATTATTGCATTAGAAGCACTAAAAGTACCCTGTAAAATCGTGCTTACCAGTGACAGCCAATATATGCGACAAGGGATC ACTCAGTGGATCCATGGCTGGAAGAAAAAAGGCTGGATCACCTCGAGTAAGCAACCGGTCAAAAATGTCGACCTGTGGAA GCGCTTAGATCTGGCGAGTAAAGGTCATGAGATTGACTGGCGCTGGGTTAAGGGTCATGCCGGACATGTCGAAAATGAGC GCTGCGACACCTTAGCCAGAGAGGCCGCAGAAGCAAAACCTAAACAAGAAGATATCGGCTATCAAGCATAA Protein sequence : MMGMKQLSIFTDGSCLGNPGPGGYGVVMKYKQHTKEIADGFLLTTNNRMELLAPIIALEALKVPCKIVLTSDSQYMRQGI TQWIHGWKKKGWITSSKQPVKNVDLWKRLDLASKGHEIDWRWVKGHAGHVENERCDTLAREAAEAKPKQEDIGYQA |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| rnhA | AAO17224.1 | RnhA | Not tested | tcd island | Protein | 8e-44 | 68 |
