Gene Information

Name : Ssed_2228 (Ssed_2228)
Accession : YP_001473965.1
Strain : Shewanella sediminis HAW-EB3
Genome accession: NC_009831
Putative virulence/resistance : Unknown
Product : glyceraldehyde-3-phosphate dehydrogenase (phosphorylating)
Function : -
COG functional category : G : Carbohydrate transport and metabolism
COG ID : COG0057
EC number : -
Position : 2688299 - 2689309 bp
Length : 1011 bp
Strand : +
Note : KEGG: slo:Shew_2002 glyceraldehyde-3-phosphate dehydrogenase, type I

DNA sequence : 
ATGTCTATCCGCGTTGCTATTAACGGCTATGGCCGTATTGGACGAAATGTTTTACGTGCACTTTATGAAAGTGAAAAAGA
TTACCCGATCGAGATTGTTGCTATCAACGATCTTGGTGATGCCTCTATCAATGCTCATTTAACTAAGTATGACTCTGTTC
ATGGTCGTTTCAACGCAAAGGTTGAACATGATGACGAAGCTATTTATGTTAATCAAGATAAAATTCTGACCTTCTCTCAA
CGTGATCCATCAAAACTGCCTTGGGCTGAGTTGAAAGTTGATGTCGTTTTCGAATGTACTGGTATGTTCACATCTAAAGA
AGCTGTTCAGCCTCACTTAGATGCAGGAGCTAAGAAAGTTCTTATCTCTGCTCCTGGTAAGAATGTTGATGCAACTGTCG
TTTACGGTGTAAACAACAATGAAATCACAGCTGATATGACGGTTGTGTCTAATGCTTCTTGTACGACTAACTGTTTGGCA
CCTGTTGCTAAACCGTTAAACGATGCAATTGGTATTGAATCAGGTCTGATGACCACTATCCACGCTTATACGAATGATCA
ACGTCTTTCAGACGTTTATCACACCGACTTACGTCGCGCTCGTGCAGCTGCAATGTCAATGATCCCAACTCAAACTGGTG
CCGCTGCAGCAGTCGGACTTGTGGTACCAGAACTTGCTGGTAAGTTTGATGGTCTGGCGGTACGTGTACCTACAGTAAAC
GTTTCACTTGTCGATCTATCATTTATTGCATCTCGCGATACTACAGTCGAAGAAGTTAACGCGATAATCGAAAAAGCTGC
TTCAGCTGCGCCAATGAGCGAAGTGTTAGCGGTTAATAAAGAGCCATTGGTTTCTATCGATTTTAACCACAACCCGTTCT
CATCAAACTTTGATGCAACTCAGACTCGTGTTAAAGGTCGCTTAGTTAAAGTGATGTCTTGGTATGATAACGAGTGGGGT
TTCAGTAACCGTATGCTAGATAATGCTGTAGCCTTGATGACTGCGAAATAA

Protein sequence : 
MSIRVAINGYGRIGRNVLRALYESEKDYPIEIVAINDLGDASINAHLTKYDSVHGRFNAKVEHDDEAIYVNQDKILTFSQ
RDPSKLPWAELKVDVVFECTGMFTSKEAVQPHLDAGAKKVLISAPGKNVDATVVYGVNNNEITADMTVVSNASCTTNCLA
PVAKPLNDAIGIESGLMTTIHAYTNDQRLSDVYHTDLRRARAAAMSMIPTQTGAAAAVGLVVPELAGKFDGLAVRVPTVN
VSLVDLSFIASRDTTVEEVNAIIEKAASAAPMSEVLAVNKEPLVSIDFNHNPFSSNFDATQTRVKGRLVKVMSWYDNEWG
FSNRMLDNAVALMTAK

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
epd AAO17215.1 Epd Not tested tcd island Protein 1e-79 51