|
Name : Ssed_2449 (Ssed_2449) Accession : YP_001474186.1 Strain : Shewanella sediminis HAW-EB3 Genome accession: NC_009831 Putative virulence/resistance : Unknown Product : 50S ribosomal protein L25 Function : - COG functional category : J : Translation, ribosomal structure and biogenesis COG ID : COG1825 EC number : - Position : 2973771 - 2974058 bp Length : 288 bp Strand : - Note : the Ctc family of proteins consists of two types, one that contains the N-terminal ribosomal protein L25 domain only which in Escherichia coli binds the 5S rRNA while a subset of proteins contain a C-terminal extension that is involved in the stress respo DNA sequence : ATGTCTTATACTATCGCAGCTGAAATCCGCACTGAAATCGGGAAAGGTTCGAGCCGCCGCCTACGTCATGCGAACAAAGT TCCTGCTGTTATCTATGGTGCTGGTAAAGAGCCTATCTCTATCAAGTTCGACCATAAAGATATCATCAATATCCAAGAAA ATGCTGATTTCTACTCAAGCGACCTAACTATCACAGTTGATGGTAAAGACGTTAAAGTACGTGTTCAGGCAATGCAGCGT CATGCATTCAAGGGCCTTATTGAGCACATCGATTTCAAATTCGCATAA Protein sequence : MSYTIAAEIRTEIGKGSSRRLRHANKVPAVIYGAGKEPISIKFDHKDIINIQENADFYSSDLTITVDGKDVKVRVQAMQR HAFKGLIEHIDFKFA |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| ESA_01051 | YP_001437155.1 | 50S ribosomal protein L25 | Not tested | Not named | Protein | 3e-24 | 56 |
