Gene Information

Name : Ssed_2872 (Ssed_2872)
Accession : YP_001474607.1
Strain : Shewanella sediminis HAW-EB3
Genome accession: NC_009831
Putative virulence/resistance : Unknown
Product : BadM/Rrf2 family transcriptional regulator
Function : -
COG functional category : K : Transcription
COG ID : COG1959
EC number : -
Position : 3478214 - 3478675 bp
Length : 462 bp
Strand : -
Note : KEGG: slo:Shew_2318 transcriptional regulator, BadM/Rrf2 family

DNA sequence :
ATGAAACTTACATCGAAAGGTCGTTATGCTGTGACAGCCATGTTAGATGTTGCTATGCATTCTACATCAGGTCCAGTGCC
ATTGGCCGATATTTCTGAGCGCCAAGGGATCTCTCTTTCTTATCTTGAACAACTTTTCGCAAAACTGAGAAAGCATGGAC
TGGTTTCAAGTGTTAGGGGCCCGGGTGGTGGTTACCGTCTAGGTGCTGATGCCGGGGAAATTTCAGTTGGTATGGTCGTA
CGTGCAGTCGATGAATCCGTCGATGCAACACGTTGTCAGGGACAAGGTAACTGTCAAAGTGGTACGCGCTGTCTGACTCA
CTCCTTGTGGGGTGATTTGAGTAAACAAATTTCTGATTTCTTAAATGGGATCAGTCTTGCTGGCTTAATGAATAAACGTG
ACGTTCAGTTTATTTCAGTTAAGCAAGATGAATTGCAACAGGAACAAAGAGTAACGGTATAA

Protein sequence :
MKLTSKGRYAVTAMLDVAMHSTSGPVPLADISERQGISLSYLEQLFAKLRKHGLVSSVRGPGGGYRLGADAGEISVGMVV
RAVDESVDATRCQGQGNCQSGTRCLTHSLWGDLSKQISDFLNGISLAGLMNKRDVQFISVKQDELQQEQRVTV

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
unnamed AAT96061.1 rrf2 family protein Not tested T-PAI Protein 1e-46 70