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Name : secF (Ssed_2889) Accession : YP_001474624.1 Strain : Shewanella sediminis HAW-EB3 Genome accession: NC_009831 Putative virulence/resistance : Unknown Product : preprotein translocase subunit SecF Function : - COG functional category : U : Intracellular trafficking, secretion and vesicular transport COG ID : COG0341 EC number : - Position : 3492537 - 3493484 bp Length : 948 bp Strand : - Note : forms a complex with SecD and YajC; SecDFyajC stimulates the proton motive force-driven protein translocation; seems to modulate the cycling of SecA by stabilizing its membrane-inserted state and appears to be required for the release of mature proteins f DNA sequence : ATGTTTCAGATTTTATCAATAAAAGGCACGATCAACTTCCTTCGCCATGCGGTTCCTATCAGTATCCTCTCTTTGGTACT GGTACTTGGTTCACTAACATCGTTAGCGACCAATGGGATTAACTGGGGATTGGATTTTACCGGTGGTACAGTCGTTGAGC TTGAGTTTTCTTCACCTTCAGATTTAGAAGCACTACGTGCTGAACTGAGCAGTGTTGAGACCGACGGTGCAGTGGTACAG AACTTCGGTTCAAGCCGTGATGTACTTGTTCGTCTCCCTGTTAAGGAAGGCGTAGCGACCGATACTCAAGTTAGCCAGGT TATGGATGCTGCACTTAAATTTGATCCACAAGTGGTTCAAAAACGTGTAGAAGTCGTTGGTCCTCAGATAGGTAAAGAGC TGGCAGAACAAGGGGGCTTAGCTGTTTTAGTCGCTCTTATCTGTATCTTGATCTATGTGTCATTCCGATTTGAGTGGCGT TTAGCCTTAGGTTCTGTCGCTGCACTTGCGCATGACGTTATCATTACTCTGGGTGTATTTTCGCTATTGCAGCTCGACTT TGACCTTACGGTACTTGCGGGTGTCTTGACGGTTGTGGGTTACTCACTTAACGATACTATCGTAGTGTTCGACCGAATTC GTGAAAACTTCCTTAAGATACGTAAAGGCGAGCCTGAAGAGATTGTTAACACTTCAATTACTCAAACTATGAGTCGTACT ATTATCACTACGGGCACAACATTAGTTGTAGTAGTAGCGTTATTCCTTAAGGGCGGCACTATGATCCATGGCTTTGCGAC AGCATTGCTGATGGGAATATTTGTCGGTACTTTCTCATCTATCTATGTCGCGAGTTTCCTTGCTGTTAAGCTTGGAATTA ACCGTGAGCATATGATGCCTGTTGAAATTGAAAAAGAGGGCGCAGATCAAGACGCGCTGATGCCTTAA Protein sequence : MFQILSIKGTINFLRHAVPISILSLVLVLGSLTSLATNGINWGLDFTGGTVVELEFSSPSDLEALRAELSSVETDGAVVQ NFGSSRDVLVRLPVKEGVATDTQVSQVMDAALKFDPQVVQKRVEVVGPQIGKELAEQGGLAVLVALICILIYVSFRFEWR LALGSVAALAHDVIITLGVFSLLQLDFDLTVLAGVLTVVGYSLNDTIVVFDRIRENFLKIRKGEPEEIVNTSITQTMSRT IITTGTTLVVVVALFLKGGTMIHGFATALLMGIFVGTFSSIYVASFLAVKLGINREHMMPVEIEKEGADQDALMP |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| secF | AAT96066.1 | SecF | Not tested | T-PAI | Protein | 2e-44 | 49 |
| secF | AAT96102.1 | SecF | Not tested | T-PAI | Protein | 5e-44 | 49 |
