|
Name : Ssed_3497 (Ssed_3497) Accession : YP_001475229.1 Strain : Shewanella sediminis HAW-EB3 Genome accession: NC_009831 Putative virulence/resistance : Virulence Product : ATPase Function : - COG functional category : O : Posttranslational modification, protein turnover, chaperones COG ID : COG0542 EC number : - Position : 4261038 - 4263611 bp Length : 2574 bp Strand : - Note : KEGG: slo:Shew_2948 ATPase AAA-2 domain protein DNA sequence : ATGCGACTCGATCGTATGACCAATAAATTTCAGACAGCAATATCCGATGCTCAGTCATTGGCATTAGGCCGTGATCATCA GTTTATTGAACCTATACATCTGATGATGGCCCTACTTAATCAAGATAATGGTTCAATTCATCCTCTGCTCACTCAAGCTG GCATACGAGTAAGTTCACTTCGTGCACTACTCAATCAGGAATTTGAACGATTATCTCAAGTGGAAGGGACCGGCGGTGAT ATTCAATTATCACAGGCATTGATTAGACTCTTAAATCTGTGTGACAAATTAGCCCAGAAACGAAAAGATAAATATATTTC CAGTGAGCTGTTTATCCTGGCGTCGCTTGAGGGAAATGACACTCTTGCACAGAATTTAAAGAAATCCGGTGCGACTAAAG AGCTGTTAGAAGAGACGATCAAGCAAATTCGGGCAGGAAAGAACGTTGACGACCCCAATGCTGAAGATCAACGTCAAGCC TTGAAAAAGTACACCGTAGATCTGACTGAGCGCGCAGAGCAGGGTAAGCTCGATCCTGTCATTGGTCGTGACGACGAGAT CCGTCGAACTATTCAAGTACTGCAGCGTCGAAGTAAAAATAATCCAGTTTTAATTGGTGAGCCCGGTGTGGGTAAGACTG CCATTGTCGAGGGGCTGGCCCAACGAATTGTCAATGGTGAAGTCCCCGAAGGTATCAAGAACAAACGTGTTCTTTCATTA GATATGGGCTCATTAGTGGCGGGAGCCAAATACCGTGGAGAATTCGAAGAGCGACTGAAAGCCGTTCTTAATGAGCTTTA TCAGGAAGAAGGTCAGGTCATTCTATTTATCGACGAACTGCATACTATGGTTGGTGCAGGGAAGGGCGATGGCGCGATGG ATGCAGGAAACATGCTTAAGCCAGCGCTGGCCCGTGGTGATCTGCACTGTGTCGGTGCGACGACATTAGATGAGTACCGT CAGTATATTGAGAAAGATGCAGCATTAGAGAGACGTTTTCAAAAGGTGTTGGTCGAGGAACCTAATGTCGAAGATACGAT AGCGATACTGCGTGGACTTAAAGAGCGTTATGAATTACATCACCATGTAGAGATCACCGATCCAGCAATCGTTGCCGCTG CCAGTATGTCAAATCGTTACGTCTCCGATCGCAAGTTACCCGACAAGGCCATCGACCTTATCGATGAAGCTGCGTCGAGC ATACGTATACAGATAGACTCTAAGCCTGAACCTTTAGACAAACTAGAGCGACGCTCGATACAGTTAAAGTTGGAGGAGCA GGCATTATCTAAGGAGACCGATGAAGCGAGTCTGCGTCGCCTGTATTCTATACGCAAAGAGTTGAGAAGCGTCGATGCTA AGGCATCAGAACTGAATGAAATTTGGCATACTGAAAAGGCATCCTTGGCGGGAACTCAACATATAAAAGCGGATCTTGAG CAGGCAAGGTTAGATCTCGATGTAGCTCGTCGAGCCAGCGATCTGACTCGTATGTCTGAACTTCAATATGGTCGAATTCC TGAGCTGGAGAAGCAGTTAGATTTGGCATCTCAAGCAGAAATGCAAGATATGACCTTACTAAGAAATAAAGTAACAGATG TTGAGATAGCAGAAGTACTGTCAAAAGCGACGGGAATTCCTGTCTCTAAAATGCTGGAAGGTGAGAAAGAGAAGCTCCTT CATATGGAAGAAGCGCTTCACTCTCGGGTCATAGGGCAAAATGAAGCTGTCGATGCCGTTTCTAACGCTATTCGTCGGAG CCGTGCCGGGCTTTCAGATCCTGACCGCCCAATCGGTTCATTTCTATTCCTGGGCCCTACCGGGGTCGGCAAGACTGAGC TTTGCAAAGCTTTAGCGAAGTTTTTATTCGATACGGAATCAGCATTGGTTCGTATCGATATGTCGGAGTTTATGGAGAAG CATTCTGTCGCGCGTTTACTTGGCGCACCTCCTGGATATGTCGGCTATGAAGAGGGAGGTTATTTAACTGAAGCGGTAAG AAGAAAGCCGTATTCTGTCATTTTACTCGATGAGGTCGAGAAAGCGCATCCGGATGTTTTCAATGTTTTACTTCAGGTGC TGGATGATGGGCGTTTAACCGATGGGCAAGGTAGGACTGTAGATTTTAGAAATACCGTGGTAATTATGACCTCTAATCTT GGCTCAGATGTTATTCAAGATAGATTTACAGAACTCTCTTATGGCGAAATGAAGTCGGAGGTGATGAACGTGGTTGTTCA TAGCTTCAGACCTGAGTTTCTTAACCGAATCGATGAGACTGTGGTATTCCATCCTCTCGATGAGAAGCATATTAAGCATA TTGCGGGTATTCAGATCGAGTCATTAAGACAACGCCTTGCAGAGAAAGAGTTCGAGCTCATATTGAGTGACGAAGCTTTA GCGCTCATTGCACGAGCTGGCTTCGACCCTATCTATGGTGCCAGACCATTGAAAAGAGCCTTGCAACAAGAGGTCGAAAA CCCGTTAGCTCAAAAAATATTGAGTGGTTCTCTTGTACCCGGGAAGCCGATTAAAATTGATTGTGCGGGTTCAGAGCTCG CCTTCGAGCAATAA Protein sequence : MRLDRMTNKFQTAISDAQSLALGRDHQFIEPIHLMMALLNQDNGSIHPLLTQAGIRVSSLRALLNQEFERLSQVEGTGGD IQLSQALIRLLNLCDKLAQKRKDKYISSELFILASLEGNDTLAQNLKKSGATKELLEETIKQIRAGKNVDDPNAEDQRQA LKKYTVDLTERAEQGKLDPVIGRDDEIRRTIQVLQRRSKNNPVLIGEPGVGKTAIVEGLAQRIVNGEVPEGIKNKRVLSL DMGSLVAGAKYRGEFEERLKAVLNELYQEEGQVILFIDELHTMVGAGKGDGAMDAGNMLKPALARGDLHCVGATTLDEYR QYIEKDAALERRFQKVLVEEPNVEDTIAILRGLKERYELHHHVEITDPAIVAAASMSNRYVSDRKLPDKAIDLIDEAASS IRIQIDSKPEPLDKLERRSIQLKLEEQALSKETDEASLRRLYSIRKELRSVDAKASELNEIWHTEKASLAGTQHIKADLE QARLDLDVARRASDLTRMSELQYGRIPELEKQLDLASQAEMQDMTLLRNKVTDVEIAEVLSKATGIPVSKMLEGEKEKLL HMEEALHSRVIGQNEAVDAVSNAIRRSRAGLSDPDRPIGSFLFLGPTGVGKTELCKALAKFLFDTESALVRIDMSEFMEK HSVARLLGAPPGYVGYEEGGYLTEAVRRKPYSVILLDEVEKAHPDVFNVLLQVLDDGRLTDGQGRTVDFRNTVVIMTSNL GSDVIQDRFTELSYGEMKSEVMNVVVHSFRPEFLNRIDETVVFHPLDEKHIKHIAGIQIESLRQRLAEKEFELILSDEAL ALIARAGFDPIYGARPLKRALQQEVENPLAQKILSGSLVPGKPIKIDCAGSELAFEQ |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| STY0294 | NP_454876.1 | ClpB-like protein | Not tested | SPI-6 | Protein | 2e-93 | 41 |
| aec27 | YP_851418.1 | ATPase | Not tested | PAI II APEC-O1 | Protein | 6e-92 | 41 |
| aec27 | AAQ96721.1 | Aec27 | Not tested | AGI-1 | Protein | 4e-92 | 41 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| Ssed_3497 | YP_001475229.1 | ATPase | VFG0079 | Protein | 4e-128 | 41 |
