|
Name : Ssed_4283 (Ssed_4283) Accession : YP_001476015.1 Strain : Shewanella sediminis HAW-EB3 Genome accession: NC_009831 Putative virulence/resistance : Unknown Product : periplasmic protein thiol--disulfide oxidoreductase DsbE Function : - COG functional category : O : Posttranslational modification, protein turnover, chaperones COG ID : COG0526 EC number : - Position : 5262285 - 5262842 bp Length : 558 bp Strand : - Note : KEGG: slo:Shew_0194 periplasmic protein thiol--disulphide oxidoreductase DsbE DNA sequence : ATGAAGAAGAGGCTAGTACTATTTATTCCGTTGGTATTATTCTTAGTTATGGGAGTCTTCCTTTATAAGGGACTCTTCCT TAATCCACAGAATCTAGACTCTGCACTGGAGGGAAAGCCGATACCGGCTTTCCAGCTAGAGCGTCTTGAGGACCGTGGTG ATTTAATTACAAACGAAAGCTTAAAAGGTCATGTTTCATTATTGAATGTATGGGCTACATGGTGCCCATCTTGTAAGTAT GAACATCCTTACCTGATGAGATTAGCAAGACAAAATATCTTGCCAATCTACGGTATTAACTATCGTGATGAGCGCGCCAT GGCGATTCGTGAGCTAAACCGTCAGGGCGACCCTTATACAGCCAACATTTTCGACCACGATGGCCGCTTAGGGTTAGACC TTGGTGTTTATGGTGCTCCGGAAAGTTACCTGGTCGATCATAATGGAATTATTCGTTACCGCTACGCTGGTCCAATCGAT CAACGCGTCTGGAATGAAACCTTATTTCCTATGATTGAAGAACTCCAGGCTGCGGCTAAATTGGATGGTGCATCATGA Protein sequence : MKKRLVLFIPLVLFLVMGVFLYKGLFLNPQNLDSALEGKPIPAFQLERLEDRGDLITNESLKGHVSLLNVWATWCPSCKY EHPYLMRLARQNILPIYGINYRDERAMAIRELNRQGDPYTANIFDHDGRLGLDLGVYGAPESYLVDHNGIIRYRYAGPID QRVWNETLFPMIEELQAAAKLDGAS |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| ccmG | YP_217240.1 | heme lyase disulfide oxidoreductase, cytocyhrome c-type biogenesis | Not tested | SPI-12 | Protein | 2e-34 | 55 |
| ccmG | AAN62105.1 | putative cytochrome C biogenesis protein CcmG | Not tested | PAGI-2(C) | Protein | 5e-29 | 41 |
