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Name : Ssed_4284 (Ssed_4284) Accession : YP_001476016.1 Strain : Shewanella sediminis HAW-EB3 Genome accession: NC_009831 Putative virulence/resistance : Unknown Product : cytochrome c-type biogenesis protein CcmF Function : - COG functional category : O : Posttranslational modification, protein turnover, chaperones COG ID : COG1138 EC number : - Position : 5262860 - 5264839 bp Length : 1980 bp Strand : - Note : KEGG: slo:Shew_0193 cytochrome c-type biogenesis protein CcmF DNA sequence : ATGATCCCAGAATTAGGACACTTATCGTTGATAATAGGATTGGCATTCGCTTTCCTGTTAGCCAGCGTTCCTTTAATTGG TGTTGCACGTAAAGACCAATACTTAGTGCGTTATGCTTGGCCATTAAGTTATGGCATGTTCTTCTTTATATTCTTATCCG TCGTTGTTCTTGGTTATAGCTTCGCTATTGATGATTTTTCGATAGCATACGTTGCTCATCATTCAAATTCACAACTGCCA ATTTTCTTTAAGATAGCTGCGGTATGGGGTGGGCATGAAGGCTCATTACTATTCTGGGTTTTCTCCCTTTCAGCATGGTC TGCAGCAGTAGCCTATTTCAGTAAATCTATTGAAGAGGTCTTCGTTGCTAGGGTACTGGCAGTACTGGCATTGATTATAA TAGGCTTTACGCTGTTTATGATCTTAACGTCGAGTCCATTTGAGCGTTTGTTCCCTGTGCCAATGGAAGGGCGCGACCTC AACCCTATGCTTCAGGATGTAGGATTAATTTTCCATCCGCCTATGTTGTACCTCGGTTATGTTGGCTTCGCCGTTAGCTT TGCTTTTGCAATTGCGGCCTTAATGGGCGGGAGTCTCGATTCTGCCTGGGCACGCTGGAGCCGTCCGTGGACACTCGCGG CTTGGGTATTCCTTACCGGTGGTATTTCATTAGGTTCTTGGTGGGCATATTATGAGCTTGGCTGGGGCGGTTGGTGGTTC TGGGATCCAGTTGAAAACGCGTCATTTATGCCTTGGTTGATCGGTACCGCGTTATTGCACTCCGTTATTGTTACTGAGAA GCGCGCCGCATTCCGTAACTGGACGGTATTGCTATCTATCTTTGCTTTCTCATTGAGCTTGCTTGGTACCTTCATCGTTC GTTCAGGTGTTCTGACTTCAGTGCATTCATTTGCAGCAGACCCAAGTCGAGGCATGTTCATTCTCTTGCTCCTGGGGCTG GCAGTCGGCGGTTCGCTCACCTTATTTGCATTTAGGGCCAGTGAGATGAAGAGTCCTGCCCGTTTCGAGCTGAAGTCAAA AGAAACCATGCTGTTAGTGTGTAATATTTTGCTGACGGTAGCGTGCGGTACGGTACTTCTGGGTACCTTGTATCCGCTAC TCATCGATGCACTAAACATGGGTAAAATTTCCGTAGGACCTCCTTACTTTAACGCAGTGTTTGTGCCTATCGTTCTTGTA CTATTTGTCTTTATGGGAATCGGTCCAAATATTCGTTGGAAAAAAACTAAGCCTGGCGAATTAAAGGCTAAGTTATTGGT ACCTGCAGTGATCGCAACGGTTGTTGGTGCGGCAGCTCCTTTCCTAGCCGATGGTCAATTCAATATCTGGGTTATGCTGG GTGTGGGTACCGCTACATGGGTTACCCTTACCACGTTAAGAGCAGCCTTCGATATCACCAAAGCTAAAGATGGCTCGTTT AGCTTGGCCAGGATGGGAAGAAGTCAGCTGGGTATGATCATTGCCCATCTGGGTATCGCTGTTTCTGTCGTAGGTGGAAC AATGGTTTCAAACTACTCGATAGAGAAAAGTGTACGTATGGGGCCTGGGATCAGCCAGGAGCTTGCCGGTTATACCTTTA ACTATATTGAAACTAAGAATGTTGTAGGTCCTAACTACACGGCTCAACAGGGGCAGGTAGAAGTCACTAAAGATGGTGAG TTTGTCGCACTGCTAAGACCGGATCGCCGTCAGTACAATGTTCGTACTATGGACATGACAGAGGCTGGAATCGATTGGGG ATTATTCAGAGATCTCTATATCACAATGGGTGATCCATTGAGTAGAACTCAGTTTGCTGTTCGTCTGAACTACAAGCCAT TTGTTCGTTGGTTATGGTTCGGAAGCATATTTATGATGGTCGGTGGTTTCTTTGCCGCATCTGATAAGCGTTATCGTACA AAGAAAGTAACAGAGGCATCGAAAGCTGATGCTCAAAAAGAGAAATTAGCTACGGCTTAA Protein sequence : MIPELGHLSLIIGLAFAFLLASVPLIGVARKDQYLVRYAWPLSYGMFFFIFLSVVVLGYSFAIDDFSIAYVAHHSNSQLP IFFKIAAVWGGHEGSLLFWVFSLSAWSAAVAYFSKSIEEVFVARVLAVLALIIIGFTLFMILTSSPFERLFPVPMEGRDL NPMLQDVGLIFHPPMLYLGYVGFAVSFAFAIAALMGGSLDSAWARWSRPWTLAAWVFLTGGISLGSWWAYYELGWGGWWF WDPVENASFMPWLIGTALLHSVIVTEKRAAFRNWTVLLSIFAFSLSLLGTFIVRSGVLTSVHSFAADPSRGMFILLLLGL AVGGSLTLFAFRASEMKSPARFELKSKETMLLVCNILLTVACGTVLLGTLYPLLIDALNMGKISVGPPYFNAVFVPIVLV LFVFMGIGPNIRWKKTKPGELKAKLLVPAVIATVVGAAAPFLADGQFNIWVMLGVGTATWVTLTTLRAAFDITKAKDGSF SLARMGRSQLGMIIAHLGIAVSVVGGTMVSNYSIEKSVRMGPGISQELAGYTFNYIETKNVVGPNYTAQQGQVEVTKDGE FVALLRPDRRQYNVRTMDMTEAGIDWGLFRDLYITMGDPLSRTQFAVRLNYKPFVRWLWFGSIFMMVGGFFAASDKRYRT KKVTEASKADAQKEKLATA |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| ccmF | AAN62106.1 | putative cytochrome C-type biogenesis protein CcmF | Not tested | PAGI-2(C) | Protein | 7e-137 | 54 |
| ccmF | YP_217241.1 | cytochrome c-type biogenesis protein | Not tested | SPI-12 | Protein | 2e-117 | 50 |
