Gene Information

Name : Ssed_4289 (Ssed_4289)
Accession : YP_001476021.1
Strain : Shewanella sediminis HAW-EB3
Genome accession: NC_009831
Putative virulence/resistance : Virulence
Product : heme exporter protein CcmC
Function : -
COG functional category : O : Posttranslational modification, protein turnover, chaperones
COG ID : COG0755
EC number : -
Position : 5268610 - 5269356 bp
Length : 747 bp
Strand : +
Note : KEGG: slo:Shew_0188 heme exporter protein CcmC

DNA sequence : 
ATGTGGAAATGGCTACATAGTTACGCGGATCCCGAACGCGCCTATAATTTATCCGGAAAACTCCTCCCTTGGTTCGCCAT
GCTGGCAACTGGACTGATAGGTATTGGTTCTGTATGGGGGCTCGTATTTGCCCCAACCGACTATCAGCAAGGTGATAGTT
ATAGAATCATCTTTATACATGTACCGGCGGCTTCTATGTCTATGGCGGCATACATGGCGATGGCCAGCTCTGCTTTTATC
GGACTTGTCTGGCAGATTAAATCCGCTGACTGGGCCGCTGCCGCGATTGCCCCCATCGGAGCTGTAATTACCTTTATTGC
ACTGATTACAGGTGCTACCTGGGGTAAACCTATGTGGGGCACTTGGTGGGTCTGGGATGCACGTTTAACCGCTGAACTGG
TACTGCTTTTCCTATATTTAGGGGTTATATCTCTTTATGCTTCGTTTGAAGATAAAGTATTAGCAGCCAGAGCCGCTGGT
ATCTTAGCCATTGTCGGCGTAATTAATATTCCGATTATTAAATACTCTGTCGAGTGGTGGAGCTCGCTGCATCAACCATC
AACAATCAAGATCACTGAGAAATCGAGTATGTCTTCAGATATGCTCTATCCATTGCTGATAAATATCGTTGGCTTTGGAA
TGATGATAGGTGCAATTACATTGATACGATTCAGAGCCGAAATTTTAGCAAGAAATGGAATGCGCCCTTGGGTACGGGAA
CTAGCTAAAGCCGAAGGAGTCAAATAA

Protein sequence : 
MWKWLHSYADPERAYNLSGKLLPWFAMLATGLIGIGSVWGLVFAPTDYQQGDSYRIIFIHVPAASMSMAAYMAMASSAFI
GLVWQIKSADWAAAAIAPIGAVITFIALITGATWGKPMWGTWWVWDARLTAELVLLFLYLGVISLYASFEDKVLAARAAG
ILAIVGVINIPIIKYSVEWWSSLHQPSTIKITEKSSMSSDMLYPLLINIVGFGMMIGAITLIRFRAEILARNGMRPWVRE
LAKAEGVK

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
ccmC AAN62109.1 putative heme exporter protein C Not tested PAGI-2(C) Protein 2e-38 49

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Ssed_4289 YP_001476021.1 heme exporter protein CcmC VFG1856 Protein 6e-42 51