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Name : Ssed_0481 (Ssed_0481) Accession : YP_001472222.1 Strain : Shewanella sediminis HAW-EB3 Genome accession: NC_009831 Putative virulence/resistance : Unknown Product : cytochrome c-type biogenesis protein CcmF Function : - COG functional category : O : Posttranslational modification, protein turnover, chaperones COG ID : COG1138 EC number : - Position : 593260 - 595230 bp Length : 1971 bp Strand : - Note : KEGG: shw:Sputw3181_0576 cytochrome c-type biogenesis protein CcmF DNA sequence : ATGATCCCAGAACTCGGACTTATACTTCTAATTATCAGCACAGTATCATCTCTGTTACTTGCCGTTATTCCACTCGTTGC CCTACACACTAAAAATCATTACCTTTTCAGCTATGTAAAGACATTAACCGGATTAATGACATTTACCATTACGGCTTCTA TTCTTTGTCTGCTTATCTCGTTTATTACCGATGATTTCTCCGTTGCCTATGTCGCCAACCATTCCAACACACAACTGGCG CTACTCTATAAAGTTGCAGCCGTCTGGGGTAGCCACGAAGGCTCTATGCTGTTTTGGGTTGTCGCCATTGCCATTTGGGG TTGCATCATCGTCTTCTCATCCAAATATCGAGACCGCTTATTTATCGGCAGGTTGATCGCAATATTAGCCTCGGTGATAG CCGGCTTTAACCTGTTTATGCTGTTTACTTCGAATCCCTTTGCCAGGTTACTGCCAAATTTCCCGATAGAGGGCCGAGAC CTTAACCCCATACTGCAAGACATAGGGTTAATCTTTCATCCACCGCTACTGTTTCTTGGCTATGTCGGCCTCACGGTGAC CTTTGCCGCCGCAATTGCGGCTCTGCTCGGCGGTAAGCTGACCCGGACACACGCAGGCTATCTTAGACCTTGGGCACTGC TGGCATGGGTATTTCTAACGGGCGGCAATGCCTTCGGTTCATGGTGGGCGTATAACGAACTGGGCTGGGGAGGATGGTGG TTTTGGGATCCGGTTGAAAATGCCTCTTTCATTCCATGGCTGGTCGCCACCGCGTTACTACACTCGGTGGTTTTGAGTCA CAGGCGTGACAGCTTTAAGGTGACCACCCTACTCTTGTGTCTGTTAGCCTTCTCGTTAAGCCTGTTAGGCACTTTCCTCG TCCGTTCGGGTATCGTGCAGTCGGTGCACGCCTTCGCATCCGATCCCACCAGAGGGATGTCGATTCTGTTCCTGCTCGGC GTATTTGTATGTGGCGCCTTAACCCTTTTCGCCCTAAAGGCTAATCAGATTAAATCTGAGCTGAATTTCACACTGGTATC GAGAGATAGCGTGATATTACTGGGTAATATTGTCTTAGTGGTCGCGGCTATATCCGTACTGCTCGGCACCTTTTATCCAC TGCTGTTTGAGCTACTCGATATTGGCACCCTGTCCGTGGGAGCGCCCTACTTTAACAGCATCTTCATTCCTCTCACTTTC ATGGCAGTGTTATTGATGGGAGCCGCACCTTTAATTTCATGGAAAAGAGAGAAGTTCTCGGCGCTGAGACCCTTAATCGT ACTCTTTATCATTGCCCTCGCCATCGCCGAAACCCTGAGCATGCTGACAGGCTCAGGTTTTAATATCTGGCTCTTTCTTG GTGCAACATCGGCCACATGGTTGATCCTGTGCTTAGGCTATCTACTGTTCCGTTTACGTCACCAGGGAATAGAAGGCTTA GCCAGAAAATCTGCGATGCTCATCGCTCACCTTGGGGTTGCCATTAGCATAATAGGTGCAACATCGGTTTCAAATTTCGA GCAGCAGGAGTTGCTGAGAATGGGACCGGCGCAAGGTAAGGTCGTTGCCGGCTATACCTTCGTGTATGAAGATACGGTCA ACGTGGATGAGAAGAGCTATACCGCTATTCAGGCAAATATTCGCGTGACCGATGCCGATGATAATTTTATCGGCTATATC ACCCCTCAACGCCAGACCTTCAAGACCAATGCCATGGAGGTCTCCAAGGCCGGCATTATGCGTAATATCTTCAGGGATCT TTATGTTTCCAGTGGTCTACAGCTCAGTGATACCGAATATCTCATCCGCATTAGCTACAAGCCGCTTGCCTGCTGGATCT GGTTAGGCGGACTCTTGATGATGCTGGGAGGAACCATAGCGGCACTTACTGGCTTATATCGCCTGCGGGTACAAAAAGCG GCCTATTCGAACAGCAATCCCATTGCCACAAGAATAGAGGGGCTAGCATGA Protein sequence : MIPELGLILLIISTVSSLLLAVIPLVALHTKNHYLFSYVKTLTGLMTFTITASILCLLISFITDDFSVAYVANHSNTQLA LLYKVAAVWGSHEGSMLFWVVAIAIWGCIIVFSSKYRDRLFIGRLIAILASVIAGFNLFMLFTSNPFARLLPNFPIEGRD LNPILQDIGLIFHPPLLFLGYVGLTVTFAAAIAALLGGKLTRTHAGYLRPWALLAWVFLTGGNAFGSWWAYNELGWGGWW FWDPVENASFIPWLVATALLHSVVLSHRRDSFKVTTLLLCLLAFSLSLLGTFLVRSGIVQSVHAFASDPTRGMSILFLLG VFVCGALTLFALKANQIKSELNFTLVSRDSVILLGNIVLVVAAISVLLGTFYPLLFELLDIGTLSVGAPYFNSIFIPLTF MAVLLMGAAPLISWKREKFSALRPLIVLFIIALAIAETLSMLTGSGFNIWLFLGATSATWLILCLGYLLFRLRHQGIEGL ARKSAMLIAHLGVAISIIGATSVSNFEQQELLRMGPAQGKVVAGYTFVYEDTVNVDEKSYTAIQANIRVTDADDNFIGYI TPQRQTFKTNAMEVSKAGIMRNIFRDLYVSSGLQLSDTEYLIRISYKPLACWIWLGGLLMMLGGTIAALTGLYRLRVQKA AYSNSNPIATRIEGLA |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| ccmF | AAN62106.1 | putative cytochrome C-type biogenesis protein CcmF | Not tested | PAGI-2(C) | Protein | 5e-88 | 45 |
| ccmF | YP_217241.1 | cytochrome c-type biogenesis protein | Not tested | SPI-12 | Protein | 3e-85 | 44 |
