Gene Information

Name : Ssed_0875 (Ssed_0875)
Accession : YP_001472614.1
Strain : Shewanella sediminis HAW-EB3
Genome accession: NC_009831
Putative virulence/resistance : Unknown
Product : erythrose 4-phosphate dehydrogenase
Function : -
COG functional category : G : Carbohydrate transport and metabolism
COG ID : COG0057
EC number : -
Position : 1042100 - 1043122 bp
Length : 1023 bp
Strand : +
Note : NAD-dependent; catalyzes the formation of 4-phosphoerythronate from erythrose 4-phosphate in the biosynthesis of pyridoxine 5'-phosphate

DNA sequence :
ATGATCAGAGTCGCAATCAATGGATATGGCCGTATCGGTCGTTCAATTCTTCGTGCTCTTTACGAGTCGGGTAAACGCGA
TCAGATTCAGATCGTGGCCATCAATGAACTCGCAACACCAGAAGCCATGCTTCATCTTACTCAATACGATACGACCCACG
GACGCTTTCAATCTCAGGCTGCTCTCGATGCTGACGGCCATAAAATGGTTATCGGTGATGATGCCATTACGCTTTTACAT
GAAAGTGATCCTAGTCAGCTCCCGTGGCGGGAGATGGATATCGATATTGTTTATGAAGCGACGGGAGCGTTTTCCGACAG
AGCAAGCTGTGAAGCTCATGTCCATGCCGGTGCGAAACAAGTATTGATAAGTCACCCCTCCTCGAGCGATGTCGATGCGA
CGATTGTCTATGGGGTCAATCACCACCTTCTTAAAGCAGAGCATACAGTGGTCTCCAATGCCTCATGTACAACAAACTGT
ATTGTGCCTGTCATCGAAGTGTTAGATGAACACTTTAAAGTGAAAAGCGGAGCCATAACGACGATTCACTCCGCGATGAA
TGACCAGCAAGTGATCGATGCCTATCATGTCGATCTGCGAAGAACGCGCGCTGCAGGTCAGTCAATTATTCCGGTCGATA
CCAAGTTAGCCAGAGGAATCGAGCGCATATTGCCTCAGATGAAAGATAAATTTGAAGCTATTTCGGTGCGGGTACCCACG
ATCAATGTCACAGCTATCGATCTTTCTGTGACTCTGGAATCAAGAGTTGACATTGCTCACGTAAATCGGGTGCTTTCTAC
TTCCTCTACAGGCCTCTATAAGGGCGTTTTAGGCTATACTAATGAGCCATTAGTATCGTGTGATTTTAACCACGATCCAA
GATCCAGCATAGTCGATGGTACTCAGACCCGAGTCAGTGATGGCCATTTAGTGAAGCTGCTCCTATGGTGCGACAACGAA
TGGGGCTTCGCTAACCGCATGTTAGATACCAGTTTAGAGATGATAAAGGCGATAAGAGCTTAA

Protein sequence :
MIRVAINGYGRIGRSILRALYESGKRDQIQIVAINELATPEAMLHLTQYDTTHGRFQSQAALDADGHKMVIGDDAITLLH
ESDPSQLPWREMDIDIVYEATGAFSDRASCEAHVHAGAKQVLISHPSSSDVDATIVYGVNHHLLKAEHTVVSNASCTTNC
IVPVIEVLDEHFKVKSGAITTIHSAMNDQQVIDAYHVDLRRTRAAGQSIIPVDTKLARGIERILPQMKDKFEAISVRVPT
INVTAIDLSVTLESRVDIAHVNRVLSTSSTGLYKGVLGYTNEPLVSCDFNHDPRSSIVDGTQTRVSDGHLVKLLLWCDNE
WGFANRMLDTSLEMIKAIRA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
epd AAO17215.1 Epd Not tested tcd island Protein 1e-104 63