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Name : secD (Spro_1063) Accession : YP_001477295.1 Strain : Serratia proteamaculans 568 Genome accession: NC_009832 Putative virulence/resistance : Unknown Product : preprotein translocase subunit SecD Function : - COG functional category : U : Intracellular trafficking, secretion and vesicular transport COG ID : COG0342 EC number : - Position : 1169432 - 1171279 bp Length : 1848 bp Strand : + Note : part of the preprotein secretory system; when complexed with proteins SecF and YajC, SecDFyajC stimulates the proton motive force-driven protein translocation, and appears to be required for the release of mature proteins from the extracytoplasmic side of DNA sequence : GTGCTAAACCGTTATCCTTTGTGGAAGTATCTGATGCTGATCGTAGTGATCATCATCGGTCTGCTTTATGCGCTTCCCAA CCTCTATGGTGAGGATCCGGCTGTACAGATCACTGGCGCGCGCGGTGTCGCCGCCAGTGAAACTACGCTGGACCAAGTCC GTACCGTATTAGAAAAAGACAAGATCGCGAGCAAGTCGATTGCGCTGGAAAATGGCGCCATCCTGGCTCGCTTTAGCAAT CCTGATATTCAGCTGCGCGCGCGTGAAGCCTTAATGGCTGAGCTGGGCGACAAGTTCGTGGTGGCGCTGAACCTGGCCCC GGCCACGCCGGCCTGGTTGGCCATGCTGGGCGCCGAACCGATGAAACTCGGTCTGGACCTGCGCGGTGGCGTGCACTTCC TGATGGAAGTGGACATGGACACTGCGCTGAGCAAACTGCAGGAACAGACCATGGACACCCTGCGCAGCGAGCTGCGTGAA AAGGGCATTCCTTATGCGTCTATCCGCAAGCTGGACAACAACGGCGTGGAAGTGCGTTTCCGTGACGATGCTGCCCGCGA TCAGGCCATCAGCTACCTTGGCCCACGCCAACGTGACATGGTGTTCTCTGCCAACGGCACCAACACCCTGAAAGCCAACC TGACGGATGCCCGCCTGAGCGAAGCGCGTGAGTATGCGGTGCAGCAGAACATCACTATCCTGCGTAACCGTGTTAACCAG CTCGGCGTTGCCGAACCGCTGGTACAACGCCAGGGTTCTGACCGCATCGTGGTCGAACTGCCGGGTATTCAGGATACCGC ACGTGCCAAAGAGATCCTGGGCGCTACCGCGACGCTGGAATTCCGTCTGGTTAACACCAATGCGGATACCACTGCGGCAG CCAATGGCCGTGTGCCGGGTGACTCCGAAGTAAAAGACACCCGCGAAGGCCAGCCGGTTGTGCTGTACAAGCGCGTGATC CTGACCGGTGACCACATTACCGACTCCACCTCCAGCACCGACGAATACAACCAGCCGCAGGTTAATATCTCGCTGGACAG TACCGGCGGTACCGCGATGTCCAACTTCACCAAGGACAATATCGGCAAGCCGATGGCGACCCTGTTTGTGGAGTACAAGG ACAGCGGCAAGAAAGACGCTAACGGCCGTGCAGTCCTGGTGAAACAGGAAGAAGTGATCAACGTGGCGAACATTCAGTCG CGTCTGGGCAACAGCTTCCGTATTACCGGCATCGGCAACCCGAACGAAGCACGTCAGCTCTCGCTGCTGCTGCGCGCCGG TGCGCTGATTGCGCCTATCCAGATCGTGGAAGAGCGGACAATCGGTCCGACCCTGGGGCAACAGAATATCACCCAAGGTC TGGAAGCCTGCTTGTGGGGCCTGGTGGCATCCATCGTGTTTATGGTGGTTTGGTACCGTAAGTTCGGCATGATCGCTACC ACGGCGCTGGTCGCCAACCTGGTGCTGATTGTCGGTGTCATGTCCCTGTTGCCGGGGGCGACGCTGACCATGCCGGGTAT TGCCGGTATCGTGCTGACGCTGGCGGTGGCGGTCGACGCCAACGTACTGATCAATGAACGTATCAAGGAAGAGCTGAAGA ACGGACGTTCCGTTCAGCAGGCGATCCATGAAGGCTATAAAGGCGCGTTCTCCAGTATCGTTGATGCCAACATCACCACC CTGATCACCGCGATTATTCTGTACGCAGTGGGCACCGGTTCGATCAAAGGCTTTGCGATTACCACCGCAATCGGTGTGGC GACGTCCATGTTCACCGCGATTGTCGGTACCCGTGCCATCGTCAACCTGCTTTACGGCGGCAAACGCATTAACAAGCTGT CTATCTGA Protein sequence : MLNRYPLWKYLMLIVVIIIGLLYALPNLYGEDPAVQITGARGVAASETTLDQVRTVLEKDKIASKSIALENGAILARFSN PDIQLRAREALMAELGDKFVVALNLAPATPAWLAMLGAEPMKLGLDLRGGVHFLMEVDMDTALSKLQEQTMDTLRSELRE KGIPYASIRKLDNNGVEVRFRDDAARDQAISYLGPRQRDMVFSANGTNTLKANLTDARLSEAREYAVQQNITILRNRVNQ LGVAEPLVQRQGSDRIVVELPGIQDTARAKEILGATATLEFRLVNTNADTTAAANGRVPGDSEVKDTREGQPVVLYKRVI LTGDHITDSTSSTDEYNQPQVNISLDSTGGTAMSNFTKDNIGKPMATLFVEYKDSGKKDANGRAVLVKQEEVINVANIQS RLGNSFRITGIGNPNEARQLSLLLRAGALIAPIQIVEERTIGPTLGQQNITQGLEACLWGLVASIVFMVVWYRKFGMIAT TALVANLVLIVGVMSLLPGATLTMPGIAGIVLTLAVAVDANVLINERIKEELKNGRSVQQAIHEGYKGAFSSIVDANITT LITAIILYAVGTGSIKGFAITTAIGVATSMFTAIVGTRAIVNLLYGGKRINKLSI |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| secD | AAT96103.1 | SecD | Not tested | T-PAI | Protein | 5e-118 | 49 |
| secD | AAT96039.1 | SecD | Not tested | T-PAI | Protein | 9e-118 | 49 |
| secD | AAT96067.1 | SecD | Not tested | T-PAI | Protein | 9e-118 | 49 |
| secD | AAT96119.1 | SecD | Not tested | T-PAI | Protein | 9e-118 | 49 |
| secD | AAT96179.1 | SecD | Not tested | T-PAI | Protein | 1e-117 | 48 |
