Gene Information

Name : Spro_1789 (Spro_1789)
Accession : YP_001478020.1
Strain : Serratia proteamaculans 568
Genome accession: NC_009832
Putative virulence/resistance : Virulence
Product : ATPase
Function : -
COG functional category : O : Posttranslational modification, protein turnover, chaperones
COG ID : COG0542
EC number : -
Position : 1965445 - 1968099 bp
Length : 2655 bp
Strand : +
Note : PFAM: AAA ATPase central domain protein; ATPase associated with various cellular activities AAA_5; ATPase AAA-2 domain protein; SMART: AAA ATPase; KEGG: kpn:KPN_01328 putative protease

DNA sequence :
ATGGAAAATTCAGCCGCCTTGTTACGTCGCCTTAATCCTTACTGTGCCCGTGCGTTAGAAGGTGCAGCATGCCTGTGTCA
GACCCGCGCCCACGCCGAAATTTTACCCGAACACTGGCTGCTGAAATTGCTGGAGCAGGGCGAAGGTGACCTGACGGTGC
TGGCGCGCCGTTATGAGTGGGATATGGACGCTCTGTGGCAGGATTTACTCGGCTGGCTGGATAACCTGCCGCGTTCCGTG
CGCAGCCGTCCTCAGTTGTCAGGCGCCATTGAATCCTTGTTGAAACAGGCGTGGATGTTTGCCTCGCTTGAAGGCAGCGA
ACACATCCGTAGTGTGCATTTGTTGGCCGCAATGATAGAAATGCCCAAAATGCTGCGCTGTGATGGCGTGTGGCCGCTGC
TGACGCTGGGGCAGAGCCAGCTTGAGCGTCTGCGCCCGTTACTGGACGCACAATCGGACGAGCGTGAGGACGTTCAGCAG
GAAGAAGCGCTGGCACAGACGCACGGTGGAGACGTTGAATTCGTCGGCCGTCCGGTCGGTGCAGAGATAAAAGAAGGTGA
ACTCAATCCTGCGCTCCAGAACGCACTGGATAAGTTCACGCTTGATGTCACCGCTAAAGCGAAAGAGGGCAACATTGACC
CGGTCTTTGGCCGCGATACCGAAATCCGCCAGATGGTGGATATTCTCTCAAGACGTCGCAAGAACAACCCGATACTGGTC
GGCGAACCGGGTGTGGGTAAAACGGCGCTGGTGGAAGGTTTGGCGCTGCGTATCGCTGAAAGTAATGTCCCTGATAGCCT
GAAAACCGTCAGCCTGCGCACTCTCGACCTGGGCCTGCTGCAGGCGGGTGCCGGCGTGAAAGGCGAATTCGAACAGCGCC
TGAAAAACGTCATCGATGCCGTACAGCAGTCGCCGACACCCGTCCTGCTGTTTATCGATGAAGCACACGCCATTATTGGT
GCGGGTAACCAGGCGGGCGGCGCGGATGCGGCTAACCTGCTGAAACCTGCATTAGCAAGGGGGGAATTACGCACTATCGC
CGCCACCACCTGGAGCGAATACAAGCAGTATTTTGAACGCGATGCTGCACTGGAGCGTCGTTTCCAGATGGTCAAAGTCG
ATGAGCCGGACGACGACACCGCCTGCCTGATGCTCAGAGGCCTGAAAGCCCGTTATGCCGAACATCACGGCGTGCATATC
ACTGATGGCGCAGTTAAAGCCGCAGTCACTCTCTCTCGCCGGTACCTGACCGGCCGTCAGTTGCCGGACAAGGCGGTTGA
CTTGCTGGATACCGCGAGTGCCCGCGTGCGCATGAGCCTGGACACTGTACCGGAGCCGCTGACCCGCATCCGGGCGCAAA
TCACCTCGCTTGAAATGGAGAAACAGGCGCTGCTTGAAGATATTGCTGTGGGCAATCAGTCCCACGGTGAGCGCCTGACG
GTGATTGAACAGGAGGAGAACAGCCTCAGCGTGGAACTCAATGAACTGGAAACCCAGTATCGTCGGGAACTCAAACTCAC
CGAACAACTACTGGAAAGCCGCCAGAACATCTCACGTCAGAGTGAAACCTACAGGCTGCAACAAGAGCTGAGCGATATGC
AGCACAGTAACTCGCTGCTCTCAGTGGATGTGGACACTCGCACCGTGGCCAACGTGATTGCCGACTGGACCGGTGTCCCG
CTCTCCTCATTAATGAAGGACGAACAGTCCGAGTTGCTGAGTCTGGAAAGTGCAATCGGCAAGCGGGTGGTAGGCCAGGA
TGTGGCCCTGAACGCTATCGCTCAGCGATTGCGTGCGGCAAAGACAGGCCTTACCTCGGAGAATGGCCCGCAGGGCGTGT
TCCTGCTGGTCGGCCCGAGCGGCACGGGTAAAACCGAAACCGCACTCACGCTGGCCGATGTGCTGTACGGCGGTGAGAAA
TCCCTTATCACCATCAACCTGTCGGAATATCAGGAACCGCACACGGTCAGCCAGCTCAAGGGCTCGCCACCGGGCTACGT
CGGTTACGGTCAGGGTGGCATTCTGACCGAAGCGGTGCGTAAACGCCCGTACAGCGTGGTGTTGCTCGACGAGGTGGAAA
AAGCGCACCGCGACGTAATGAATCTGTTCTATCAGGTGTTTGACCGGGGCTTTATGCGCGACGGCGAAGGCCGTGAAATT
GATTTCCGTAACACCGTGATCCTGATGACGTCCAACCTCGGCAGCGACCCCATCATGCAACTACTGGATGAACAGCCAGA
AGCCACCGAAGGCGATTTGCACGAACTGCTGCGCCCGATATTGCGTGACCACTTCCAGCCCGCGCTGCTGGCCCGTTTCC
AGACCGTGATTTACCGCCCGCTGAGTGAGCCTGCGATGCGCATCATTGTTGAAATGAAACTCGGACAGGTCAGCAAACGC
CTGCACCGTCACTATGGCCTGACCACGCATATTGACGAAAGTCTTTTCGATGCTCTGACCGCCGCCTGCCTGTTGCCGGA
TACCGGCGCACGTAACGTCGACAGCCTGCTCAATCAACAAATTCTACCGGTACTGAGTCAGCAACTGCTGACCCACATGG
CTGCAAAACAGAAACCACAGTCGTTACGCCTTAGCTGGAGTGAGGAAGATGGCATAGGGCTGGAGTTTGACGCTCTGCAA
CCGGACGCTGTGTGA

Protein sequence :
MENSAALLRRLNPYCARALEGAACLCQTRAHAEILPEHWLLKLLEQGEGDLTVLARRYEWDMDALWQDLLGWLDNLPRSV
RSRPQLSGAIESLLKQAWMFASLEGSEHIRSVHLLAAMIEMPKMLRCDGVWPLLTLGQSQLERLRPLLDAQSDEREDVQQ
EEALAQTHGGDVEFVGRPVGAEIKEGELNPALQNALDKFTLDVTAKAKEGNIDPVFGRDTEIRQMVDILSRRRKNNPILV
GEPGVGKTALVEGLALRIAESNVPDSLKTVSLRTLDLGLLQAGAGVKGEFEQRLKNVIDAVQQSPTPVLLFIDEAHAIIG
AGNQAGGADAANLLKPALARGELRTIAATTWSEYKQYFERDAALERRFQMVKVDEPDDDTACLMLRGLKARYAEHHGVHI
TDGAVKAAVTLSRRYLTGRQLPDKAVDLLDTASARVRMSLDTVPEPLTRIRAQITSLEMEKQALLEDIAVGNQSHGERLT
VIEQEENSLSVELNELETQYRRELKLTEQLLESRQNISRQSETYRLQQELSDMQHSNSLLSVDVDTRTVANVIADWTGVP
LSSLMKDEQSELLSLESAIGKRVVGQDVALNAIAQRLRAAKTGLTSENGPQGVFLLVGPSGTGKTETALTLADVLYGGEK
SLITINLSEYQEPHTVSQLKGSPPGYVGYGQGGILTEAVRKRPYSVVLLDEVEKAHRDVMNLFYQVFDRGFMRDGEGREI
DFRNTVILMTSNLGSDPIMQLLDEQPEATEGDLHELLRPILRDHFQPALLARFQTVIYRPLSEPAMRIIVEMKLGQVSKR
LHRHYGLTTHIDESLFDALTAACLLPDTGARNVDSLLNQQILPVLSQQLLTHMAAKQKPQSLRLSWSEEDGIGLEFDALQ
PDAV

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
STY0294 NP_454876.1 ClpB-like protein Not tested SPI-6 Protein 9e-145 44

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Spro_1789 YP_001478020.1 ATPase VFG2076 Protein 1e-162 44
Spro_1789 YP_001478020.1 ATPase VFG2084 Protein 2e-137 43
Spro_1789 YP_001478020.1 ATPase VFG0079 Protein 1e-108 41