|
Name : Spea_1485 (Spea_1485) Accession : YP_001501345.1 Strain : Shewanella pealeana ATCC 700345 Genome accession: NC_009901 Putative virulence/resistance : Unknown Product : RNA methyltransferase Function : - COG functional category : J : Translation, ribosomal structure and biogenesis COG ID : COG0565 EC number : - Position : 1807534 - 1808298 bp Length : 765 bp Strand : + Note : TIGRFAM: RNA methyltransferase, TrmH family, group 1; PFAM: tRNA/rRNA methyltransferase (SpoU); KEGG: slo:Shew_2320 RNA methyltransferase, TrmH family, group 1 DNA sequence : ATGCTCAGCAATATTCGCGTCGTTCTTGTCGGTACTTCCCATCCAGGGAATATAGGTTCTACAGCCCGTGCTATGAAAAC CATGGGGTTATCCACTTTATATTTGGCAGAGCCAAAGGTTGAGCCAGATGGCCACTCTATTGCGTTAGCCGCTGGTGCTT CAGATATTCTTAAACATGCTATTACCGTTAGCTCTGTAGAAGAAGCCATCGCCGATTGTAGCCTTGTTATCGCAACCAGT GCTCGTAGTCGCACTTTGGACTGGCCAATGCTTGAGCCACGTGAAGCGGGTGAGAAGCTAGTGGGTTCTGCGCTTAATGG CCCTGTGGCGATTGTATTTGGTCGTGAGAATAACGGTTTGACTAATGAAGAGCTACAGCGCTGTGATTACCACGTCGCTA TTCCGGCAAACCCTGAATATACTTCTTTGAATCTGGCCCAAGCGGTACAGATTATCTGTTATGAGGCGCGAGTGGCACAT CTTGCTCAAGTGCAAAACTCTGCAGAAGCTGTGATCGAAACAGAAAGTGAAGAGGCTCAAGAAGACTTTCCATCATCAAA AGAGCGTGAGAATTTCTTCGAGCATCTAGAGAATACGCTTTTTTCGACAAACTTTATCGTCAAAAACCATCCTGGCCAGA TAATGACTAAGTTACGTCGCCTATTTAGCCGTACCCGAATTGAACGCCAAGAGATGAATATCTTGCGCGGTATATTGACC TCGATTGATAAAGTCGTCGCTAAAAGTGAGACTAAAGATAAGTAA Protein sequence : MLSNIRVVLVGTSHPGNIGSTARAMKTMGLSTLYLAEPKVEPDGHSIALAAGASDILKHAITVSSVEEAIADCSLVIATS ARSRTLDWPMLEPREAGEKLVGSALNGPVAIVFGRENNGLTNEELQRCDYHVAIPANPEYTSLNLAQAVQIICYEARVAH LAQVQNSAEAVIETESEEAQEDFPSSKERENFFEHLENTLFSTNFIVKNHPGQIMTKLRRLFSRTRIERQEMNILRGILT SIDKVVAKSETKDK |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| unnamed | AAT96063.1 | group 1 trmH family protein | Not tested | T-PAI | Protein | 4e-63 | 52 |
