Gene Information

Name : Spea_0213 (Spea_0213)
Accession : YP_001500076.1
Strain : Shewanella pealeana ATCC 700345
Genome accession: NC_009901
Putative virulence/resistance : Virulence
Product : heme exporter protein CcmC
Function : -
COG functional category : O : Posttranslational modification, protein turnover, chaperones
COG ID : COG0755
EC number : -
Position : 225741 - 226487 bp
Length : 747 bp
Strand : -
Note : TIGRFAM: heme exporter protein CcmC; PFAM: cytochrome c assembly protein; KEGG: slo:Shew_0188 heme exporter protein CcmC

DNA sequence : 
ATGTGGAAATGGTTACATTCATACGCGGATCCTGAACGCGCCTACAAACTCTCAGGCACCCTACTACCTTGGTTTGCCAT
GCTTGCAATATCGATGATTGGTCTCGGTACGGTTTGGGGCTTGGCTTTTGCTCCGACTGATTATCAACAAGGTGACAGTT
ACCGAATCATCTTTATTCATGTACCAGCCGCTTCTATGTCGATGGCAGCTTACATGGCCATGGCGACATCTTCGTTTATC
GGACTTGTATGGCAAATTAAGTCTGCCGACTGGGCTGCGGCGGCTATTGCACCAATCGGTGCGGTCATTACCTTTATTGC
GCTTATTACAGGTGCAACATGGGGCAAGCCTATGTGGGGTACATGGTGGGTTTGGGATGCACGCTTAACATCTGAACTAG
TACTGTTATTCTTATACCTAGGTGTTATCTCTCTTTATGCTTCATTTGAAGATAAAGTATTGGCTGCTAGAGCCGCTGGC
ATTTTAGCAATCGTTGGTGTGATTAACATTCCAATCATCAAGTACTCTGTAGATTGGTGGAGCTCACTGCACCAGCCATC
TACAATCAAGATCACTGAAGAATCTTCTATGCCTTCAGAGATGTTATATCCACTCCTAATTAACATCATGGGATTCGGTA
TAATGATTGGTGCGATAACATTAGTGAGATTTAGATCAGAAATTTTGGCACGAAATGGCATGCGTCCATGGGTTCGTGAA
CTTGCTAAAGCAGAAGGGGTCAAATAA

Protein sequence : 
MWKWLHSYADPERAYKLSGTLLPWFAMLAISMIGLGTVWGLAFAPTDYQQGDSYRIIFIHVPAASMSMAAYMAMATSSFI
GLVWQIKSADWAAAAIAPIGAVITFIALITGATWGKPMWGTWWVWDARLTSELVLLFLYLGVISLYASFEDKVLAARAAG
ILAIVGVINIPIIKYSVDWWSSLHQPSTIKITEESSMPSEMLYPLLINIMGFGIMIGAITLVRFRSEILARNGMRPWVRE
LAKAEGVK

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
ccmC AAN62109.1 putative heme exporter protein C Not tested PAGI-2(C) Protein 1e-37 48

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Spea_0213 YP_001500076.1 heme exporter protein CcmC VFG1856 Protein 3e-41 49