|
Name : Spea_0218 (Spea_0218) Accession : YP_001500081.1 Strain : Shewanella pealeana ATCC 700345 Genome accession: NC_009901 Putative virulence/resistance : Unknown Product : cytochrome c-type biogenesis protein CcmF Function : - COG functional category : O : Posttranslational modification, protein turnover, chaperones COG ID : COG1138 EC number : - Position : 230915 - 232894 bp Length : 1980 bp Strand : + Note : TIGRFAM: cytochrome c-type biogenesis protein CcmF; PFAM: cytochrome c assembly protein; KEGG: shm:Shewmr7_0229 cytochrome c-type biogenesis protein CcmF DNA sequence : ATGATCCCAGAATTAGGACACTTTTCGCTGATTATCGGCCTGGCATTCGCCATGCTGTTAGCCATCGTTCCTTTAGTAGG TGTAGCTCGTAAAGACCAATACCTAGTGCGCTATGCTTGGCCACTAAGTTACGGCATGTTCTTCTTTATTCTCTTCTCTG TTATTGCGCTTGGCTATAGCTTCGCAGTCGATGACTTCTCTGTAGCTTATGTAGCACATCATTCCAACTCTGAATTGCCA ATCTTTTTTAAGATAGCTGCCGTATGGGGTGGGCATGAAGGTTCATTGCTATTCTGGGTATTCTCATTAGCGGCTTGGGC TGCAGCGGTTGCGCTATTTAGTAAGGGCTTAGAAGAAGTCTTTACTGCACGAGTGCTGTCGGTGTTAGCAATGATCTTAA TCGGCTTTACGCTATTTATGTTGCTGACCTCTAGCCCATTTGAGCGTTTATTCCCAATCCCGATGGAAGGTCGTGACCTT AACCCAATGTTGCAAGACGTTGGATTGATTTTCCACCCTCCAATGTTGTACCTAGGTTATGTTGGCTTCTCTGTCAGTTT TGCATTCGCAATTGCTGCTCTTATGAGTGGACGACTAGACTCTGCATGGGCTCGTTGGAGTCGTCCTTGGACACTAGCAG CTTGGGTATTCCTAACTGGCGGTATCTCACTAGGTTCTTGGTGGGCATATTACGAACTCGGTTGGGGTGGTTGGTGGTTC TGGGATCCAGTTGAAAACGCCTCTTTTATGCCTTGGTTGATTGGTACAGCTCTACTTCACTCGTTAATCGTAACCGAGAA GCGTGGTGCATTCCGTAACTGGACCGTTCTACTTTCAATCTTTGCTTTCTCATTAAGTTTACTTGGTACCTTTATTGTTC GTTCTGGCGTGTTAACTTCGGTTCACTCGTTCGCTGCGGATCCAAGTCGAGGTATGTTCATCCTATTGCTACTCGGTTTA GCAATTGGTGGCTCACTCACACTATTCGCTTTCAGAGCGAGTGAGATGCGTAGCCCAGCACGTTTTGAGCTGAAATCAAA AGAGACCATGCTACTGGTATGTAACCTGTTGTTAACGGTCGCTTGTGGTACTGTTTTACTCGGTACTCTTTACCCGCTGC TAATCGATGCACTGGGTATGGGTAAGATCTCTGTAGGACCTCCATACTTTAACGCCGTATTTGTTCCAATCGTTCTTGTA CTATTTGGCTTTATGGGTATAGGTCCAATTATCCGCTGGAAGAAATCTAAAGCGGGTGAGCTTAAGCGTCAGCTTATTAT CCCTGCAGTGATTTCTGCAGTCGTTGGTCTAGCTGCGCCATTTATTGCCGGCGGTGAGTTTAACGCTTGGGTAGTATTTG GTATTGCGGCAGCGGTATGGGTCACACTGATGACATTCCGTGCTGCTTATAACATGGTTAAGACTAAAGATGGCTCAATT GATTTGACTCGTCTTGGACGTAGCCAGCTGGGCATGATCATTGCTCACCTTGGTATTGCGGTATCTGTTGTTGGTGCCAC CATGGTTTCGAACTACTCATTAGAGAAGAGTGTCCGTATGGGCCCAGGCATTTCTCATGAGTTAGCGGGTTATACCTTTA ACTATGTTGAAACCAAGAATGTTGTTGGTCCAAACTACACGGCTCAACAAGGTCAAATTGAGGTTTACCAGGGAGACGAT TATGTAACCCTGCTTAGACCTGACCGTCGCCAATACAATGTTCGTACTATGGACATGACTGAGGCGGGTATCGACTGGGG CCTATTCCGAGATCTTTACGTGACAATGGGTGATCCAATTAGCCGTACTGAGTACGCGGTGCGTATTAACTACAAGCCTT TCGTTCGTTGGATCTGGTTTGGTTCAATCTTTATGATGGTTGGTGGTTTCTTCGCTGCTTCTGATAAGCGTTATCGCGTA AAGGCTAAGAGCACAGAAAAGACAGCTGCTAAAGAAGCTGACAAGTTAGCTACGGCTTAA Protein sequence : MIPELGHFSLIIGLAFAMLLAIVPLVGVARKDQYLVRYAWPLSYGMFFFILFSVIALGYSFAVDDFSVAYVAHHSNSELP IFFKIAAVWGGHEGSLLFWVFSLAAWAAAVALFSKGLEEVFTARVLSVLAMILIGFTLFMLLTSSPFERLFPIPMEGRDL NPMLQDVGLIFHPPMLYLGYVGFSVSFAFAIAALMSGRLDSAWARWSRPWTLAAWVFLTGGISLGSWWAYYELGWGGWWF WDPVENASFMPWLIGTALLHSLIVTEKRGAFRNWTVLLSIFAFSLSLLGTFIVRSGVLTSVHSFAADPSRGMFILLLLGL AIGGSLTLFAFRASEMRSPARFELKSKETMLLVCNLLLTVACGTVLLGTLYPLLIDALGMGKISVGPPYFNAVFVPIVLV LFGFMGIGPIIRWKKSKAGELKRQLIIPAVISAVVGLAAPFIAGGEFNAWVVFGIAAAVWVTLMTFRAAYNMVKTKDGSI DLTRLGRSQLGMIIAHLGIAVSVVGATMVSNYSLEKSVRMGPGISHELAGYTFNYVETKNVVGPNYTAQQGQIEVYQGDD YVTLLRPDRRQYNVRTMDMTEAGIDWGLFRDLYVTMGDPISRTEYAVRINYKPFVRWIWFGSIFMMVGGFFAASDKRYRV KAKSTEKTAAKEADKLATA |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| ccmF | AAN62106.1 | putative cytochrome C-type biogenesis protein CcmF | Not tested | PAGI-2(C) | Protein | 1e-142 | 54 |
| ccmF | YP_217241.1 | cytochrome c-type biogenesis protein | Not tested | SPI-12 | Protein | 4e-117 | 51 |
