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Name : Spea_0478 (Spea_0478) Accession : YP_001500341.1 Strain : Shewanella pealeana ATCC 700345 Genome accession: NC_009901 Putative virulence/resistance : Unknown Product : cytochrome c-type biogenesis protein CcmF Function : - COG functional category : O : Posttranslational modification, protein turnover, chaperones COG ID : COG1138 EC number : - Position : 587512 - 589494 bp Length : 1983 bp Strand : - Note : TIGRFAM: cytochrome c-type biogenesis protein CcmF; PFAM: cytochrome c assembly protein; KEGG: son:SO_0478 cytochrome c-type biogenesis protein CcmF DNA sequence : ATGATCCCAGAGCTAGGACTTATTTTCCTTATCATTAGCACAGTCACGGCGGTGTTACTTGCGTTTATTCCGCTCTATGC GTCATATACTAAAAACCATTACTTATTTAGTTATGTAAAAACATTAACCGCATTAATGACGGTGACCATTAGCGCTTCTA TATTATGTTTACTTGTTTCGTTTTTACTCGATGACTTCTCGGTGGCTTATGTAGCCAACCACTCTAATACTCAGCTAGCG ATCCTATATAAGGTGGCTGCGGTTTGGGGTAGCCATGAAGGCTCGATGCTGTTTTGGGTAGTGTCTATCGCAATTTGGGG CTGCTTGATTGTATTCTCGTCGCGCTATCAAGACCCACTATTTATCGGCCGCATGATCGCCATACTGGCGTTTGTGATTG CAGGCTTTAACCTGTTTATGCTGTTCACTTCAAACCCTTTTGCCCGCTTGCTCCCCAACTTCCCAATCGAGGGGCGCGAC CTTAACCCGATTTTACAAGACATAGGCTTGATCTTTCATCCACCCATGCTATTCCTCGGCTATGTTGGCCTGACAGTCAC TTTTGCCGCCGCGATTGCAGCGCTACTTGGTGGCAAGTTTACTCAACAACATGCTGGCTACCTGCGCCCTTGGGTACTTA TGGCTTGGGTATTTTTAACTGGCGGCAATGCCTTTGGTTCTTGGTGGGCTTATAACGAACTTGGTTGGGGAGGATGGTGG TTCTGGGATCCGGTGGAAAACGCCTCGTTTATTCCCTGGCTTGTGGCAACCGCGCTATTACATAGCGTTGTTCTGAGTCA GCAGCGTAGCAGTTTTAAGATCACTACCCTATTGCTGTGTTTACTGGCATTCTCATTGAGCTTATTAGGCACCTTCTTAG TGCGATCTGGAATCGTGCAGTCTGTACACGCCTTTGCTTCAGACCCTACTCGCGGCATGTCGATTCTATTCCTATTGGGT GTTTTTGTGTGTGGCGCCTTAACCCTGTTTGCCTTAAAGGCTCATTTGATTAAGTCTAAATCTGACTTTGCCCTCGTCTC ACGAGATAGCGTGATGTTGCTCGGCAACATCGTCTTAATCGTGGCCGCTATCTCTGTGCTACTCGGTACCTTCTATCCAC TGTTATTCGAACTATTGAATCTAGGAACCCTATCGGTTGGCGCGCCCTACTTTAACAGCATCTTCGTGCCACTGACCTTT GTTGCCGTACTATTGATGGGCGCCGCACCTTTGATTAAATGTCAGCAATCTAGTCATCGTTTATACCTTCTTGCAGGCCT ATTCGCCGCAGCGGCAAGCATTGGCGTATTGGTTGCACTACAAACCCGTGGTGGTTTCAACCCTTGGGTATGGATGGGTG CTACTTCAGCTAGCTGGATATTACTAACTCTTGGCTACTTAATGTTTAACCTACGCCAGCAAGGATTAGCCGTTATCGCT AACAAGTCGGCCATGTTGATCGCTCACCTTGGTGTGGCTGTCACAATTATCGGCGCTACAGCCGTATCCAACTTTGAAAC GGAGGAGTTACTCAGAATGGGGCCGGGTCAAGGCAAGGTCGTGGCTGGCTACACCTTCGTCTATGAAGATACTGTCGATG TTGAATCAAGCAGCTACACCGCGATTCAGGCTAATATTCGCGTGACCGATGTGGATGATAAGTTTATTGGCTATATCACC CCGCAAAGACAAACCTTTAAGACTAACGCCATGGAGACGACTCAAGCGGGCATCATGCGTAATTTAGTGCGGGATCTGTA TGTATCGAGCGGCCAGCAACTGAGTGAAACCGAATACCTAGTACGTATTAGCCATAAGCCGCTTGCTTGCTGGATTTGGA TTGGTGGCCTAATGATGATGCTAGGTGGTTTTATTGCCGCGATGTCAGGGCTTTATAGCTTGCGTCAGCAACGCACTGCT GTTGATTCATCTGTCGCGACGACGCAATACGCAAATACATACAGCGCCAAGGAGCTAGCATGA Protein sequence : MIPELGLIFLIISTVTAVLLAFIPLYASYTKNHYLFSYVKTLTALMTVTISASILCLLVSFLLDDFSVAYVANHSNTQLA ILYKVAAVWGSHEGSMLFWVVSIAIWGCLIVFSSRYQDPLFIGRMIAILAFVIAGFNLFMLFTSNPFARLLPNFPIEGRD LNPILQDIGLIFHPPMLFLGYVGLTVTFAAAIAALLGGKFTQQHAGYLRPWVLMAWVFLTGGNAFGSWWAYNELGWGGWW FWDPVENASFIPWLVATALLHSVVLSQQRSSFKITTLLLCLLAFSLSLLGTFLVRSGIVQSVHAFASDPTRGMSILFLLG VFVCGALTLFALKAHLIKSKSDFALVSRDSVMLLGNIVLIVAAISVLLGTFYPLLFELLNLGTLSVGAPYFNSIFVPLTF VAVLLMGAAPLIKCQQSSHRLYLLAGLFAAAASIGVLVALQTRGGFNPWVWMGATSASWILLTLGYLMFNLRQQGLAVIA NKSAMLIAHLGVAVTIIGATAVSNFETEELLRMGPGQGKVVAGYTFVYEDTVDVESSSYTAIQANIRVTDVDDKFIGYIT PQRQTFKTNAMETTQAGIMRNLVRDLYVSSGQQLSETEYLVRISHKPLACWIWIGGLMMMLGGFIAAMSGLYSLRQQRTA VDSSVATTQYANTYSAKELA |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| ccmF | YP_217241.1 | cytochrome c-type biogenesis protein | Not tested | SPI-12 | Protein | 3e-95 | 43 |
| ccmF | AAN62106.1 | putative cytochrome C-type biogenesis protein CcmF | Not tested | PAGI-2(C) | Protein | 2e-93 | 41 |
