Gene Information

Name : Clos_2082 (Clos_2082)
Accession : YP_001513614.1
Strain : Alkaliphilus oremlandii OhILAs
Genome accession: NC_009922
Putative virulence/resistance : Resistance
Product : ABC transporter
Function : -
COG functional category : V : Defense mechanisms
COG ID : COG1136
EC number : -
Position : 2216584 - 2217351 bp
Length : 768 bp
Strand : -
Note : PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: csc:Csac_0507 ABC transporter related

DNA sequence : 
ATGAAAATTTTAGAAGTAAACAACTTAAAAAAAGTATATACCACTCGATTTGGTGGAAATCATGTTCAGGCCCTTACGAA
TATCTCTTTTTCTGTTGAGGAAGGAGAATACGTGGCGATTATGGGGGAGTCTGGATCTGGAAAGACAACGCTCCTCAATA
TTATTGCGTCTTTAGATAAGCCAACCAGTGGCGATGTAATTCTGGGAGGAAAAAATATTGTCTCTATAAAAGAAAGAGAA
ATTTCTATATTTCGTAGAGAAAATTTAGGTTTTGTCTTTCAGGACTTTAATTTACTGGATACATTTTCACTTCAGGATAA
TATTTTTCTACCTTTAGTTCTATCGGGAAAGACCCATGAGGAAATGAACCGTAAATTGACGCCGATTGCACAGCATCTTG
GAATTAGCCAAATTTTAAAGAAATATCCCTATGAGGTTTCTGGTGGCCAGAAGCAGCGTGCAGCCGTTGCTCGTGCTCTG
ATTACGAATCCGAAGCTAATTCTTGCAGATGAGCCAACGGGCGCCTTGGATTCCCATGCAGCCGACGGCTTGCTGAAGTT
ATTTAATGATATCAACGACCATGGTCAGACCATTTTAATGGTAACCCATAGCGTGAAAGCGGCCAGTCATGCAAAGCGTG
TTTTATTTATTAAGGATGGAGAAGTATTCCATCAGCTTTACAGAGGTGCTATGCAGAAGGAAGAAATGTATCAAAAAATT
TCAGATACTTTAATTACCATTGCAACTGGTGGTGGACAATATGAATAA

Protein sequence : 
MKILEVNNLKKVYTTRFGGNHVQALTNISFSVEEGEYVAIMGESGSGKTTLLNIIASLDKPTSGDVILGGKNIVSIKERE
ISIFRRENLGFVFQDFNLLDTFSLQDNIFLPLVLSGKTHEEMNRKLTPIAQHLGISQILKKYPYEVSGGQKQRAAVARAL
ITNPKLILADEPTGALDSHAADGLLKLFNDINDHGQTILMVTHSVKAASHAKRVLFIKDGEVFHQLYRGAMQKEEMYQKI
SDTLITIATGGGQYE

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
Cp1002_1464 YP_005681730.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 5e-37 41

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Clos_2082 YP_001513614.1 ABC transporter CP001581.1.gene798.p Protein 4e-42 46
Clos_2082 YP_001513614.1 ABC transporter CP001581.1.gene598.p Protein 2e-38 44
Clos_2082 YP_001513614.1 ABC transporter NC_012469.1.7686878. Protein 2e-39 44