Gene Information

Name : Clos_2176 (Clos_2176)
Accession : YP_001513708.1
Strain : Alkaliphilus oremlandii OhILAs
Genome accession: NC_009922
Putative virulence/resistance : Unknown
Product : cold-shock DNA-binding domain-containing protein
Function : -
COG functional category : K : Transcription
COG ID : COG1278
EC number : -
Position : 2321578 - 2321778 bp
Length : 201 bp
Strand : -
Note : PFAM: Cold-shock protein DNA-binding; SMART: Cold shock protein; KEGG: cdf:CD1355 putative cold shock protein

DNA sequence :
ATGAAAACAGGTATAGTTAAATGGTTTAACAACGAAAAAGGATTTGGATTTATCTCAGTACAAGGAGAAGAAGATGTATT
CGTACATTTCTCAGCAATCAACGGAGACGGATTCAAGACTTTAGAAGAAGGTCAAGAAGTAGAATTCGAAGTAGTATCAG
GTGCTAGAGGACCTCAAGCTGCTAACGTATCTAGAATATAA

Protein sequence :
MKTGIVKWFNNEKGFGFISVQGEEDVFVHFSAINGDGFKTLEEGQEVEFEVVSGARGPQAANVSRI

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
unnamed AAO18076.1 unknown Not tested TTSS locus Protein 7e-15 67
cspH YP_216241.1 cold shock protein-like protein Not tested SPI-11 Protein 0.002 44